CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Genemark.3077_g
(
Heterobasidion annosum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Genemark.3077_g
T335241_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.3077_g
Sox
152
223
PPRPPNAWILYRSDRLRALPPVAPGAPRRPQSEISKEIARMWKNEAEETKSEYERRAELAKAEHARQYPNYR
Links
Other
Sox
family TFs
Other
Heterobasidion annosum
TFs
182 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB55306
Apis mellifera
GB55306
I
fgenesh2_pg.scaffold_29000123
Branchiostoma floridae
fgenesh2_pg.scaffold_29000123
I
fgenesh2_pg.scaffold_226000032
Branchiostoma floridae
fgenesh2_pg.scaffold_226000032
I
fgenesh2_pg.scaffold_226000031
Branchiostoma floridae
fgenesh2_pg.scaffold_226000031
I
Cflo_03885--XP_001120527.1_APIME
Camponotus floridanus
Cflo_03885--XP_001120527.1_APIME
I
CapteG36721
Capitella teleta
CapteG36721
I
CLEC002330
Cimex lectularius
CLEC002330
I
csin100742
Clonorchis sinensis
csin100742
I
CGI_10007380
Crassostrea gigas
CGI_10007380
I
YQE_11476
Dendroctonus ponderosae
YQE_11476
I
GF18746
Drosophila ananassae
FBgn0095763
I
GG12413
Drosophila erecta
FBgn0104701
I
GH13904
Drosophila grimshawi
FBgn0121380
I
nau
Drosophila melanogaster
FBgn0002922
D
GI24830
Drosophila mojavensis
FBgn0147551
I
GL13832
Drosophila persimilis
FBgn0151437
I
GA10192
Drosophila pseudoobscura
FBgn0070251
I
GM23547
Drosophila sechellia
FBgn0178413
I
GD18361
Drosophila simulans
FBgn0189889
I
GJ24474
Drosophila virilis
FBgn0211554
I
GK22777
Drosophila willistoni
FBgn0224749
I
GE23932
Drosophila yakuba
FBgn0241076
I
ECANG7_02004
Echinococcus canadensis
ECANG7_02004
I
EmuJ_001053100
Echinococcus multilocularis
EmuJ_001053100
I
ECPE_0001678601
Echinostoma caproni
ECPE_0001678601
I
D915_09890
Fasciola hepatica
D915_09890
I
Hsal_05065--XP_001120527.1_APIME
Harpegnathos saltator
Hsal_05065--XP_001120527.1_APIME
I
HmN_000553800
Hymenolepis microstoma
HmN_000553800
I
HNAJ_0001324201
Hymenolepis nana
HNAJ_0001324201
I
LDEC009949
Leptinotarsa decemlineata
LDEC009949
I
LCUP007809
Lucilia cuprina
LCUP007809
I
LLOJ004446
Lutzomyia longipalpis
LLOJ004446
I
MCOS_0000168001
Mesocestoides corti
MCOS_0000168001
I
NV10294
Nasonia vitripennis
NV10294
I
Ocbimv22002759m.g
Octopus bimaculoides
Ocbimv22002759m.g
I
T265_10140
Opisthorchis viverrini
T265_10140
I
PHUM424120
Pediculus humanus
PHUM424120
I
RPRC009735
Rhodnius prolixus
RPRC009735
I
nRc.2.0.1.g24248
Romanomermis culicivorax
nRc.2.0.1.g24248
I
A_07871
Schistosoma haematobium
A_07871
I
Sjc_0011830
Schistosoma japonicum
Sjc_0011830
I
Smp_167400
Schistosoma mansoni
Smp_167400
I
SMU15001149
Schmidtea mediterranea
SMU15001149
I
SBAD_0001285401
Soboliphyme baturini
SBAD_0001285401
I
SPER_0001779001
Spirometra erinaceieuropaei
SPER_0001779001
I
SPER_0002215301
Spirometra erinaceieuropaei
SPER_0002215301
I
SPU_021119
Strongylocentrotus purpuratus
SPU_021119
I
TASK_0000583801
Taenia asiatica
TASK_0000583801
I
TsM_000079400
Taenia solium
TsM_000079400
I
TC015855
Tribolium castaneum
TC015855
I
D917_06339
Trichinella nativa
D917_06339
I
EFV52759
Trichinella spiralis
EFV52759
I
TRE_0000306101
Trichobilharzia regenti
TRE_0000306101
I
TMUE_s0045001800
Trichuris muris
TMUE_s0045001800
I
D918_04086
Trichuris suis
D918_04086
I
TTRE_0000002701
Trichuris trichiura
TTRE_0000002701
I