CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFAF009984
(
Anopheles farauti
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AFAF009984
T335581_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFAF009984-PA
Sox
6
50
QIVFVDFSRQCGERWKTMVDAEKERFHEMAKKDKERYDLEMKSFV
AFAF009984-PA
Sox
72
140
PKRPLTAFFLYTRDERDKVKALNPEYGVGAVAKELGRMWSTIDPDIKQQYLMKAQQDKQRYEQELVAYK
Links
Other
Sox
family TFs
Other
Anopheles farauti
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
H311_00925
Anncaliia algerae
H311_00925
N
TRIM56
Anolis carolinensis
ENSACAG00000007859
N
BGLB003577
Biomphalaria glabrata
BGLB003577
N
BGLB000529
Biomphalaria glabrata
BGLB000529
N
Bra032973
Brassica rapa
Bra032973
N
PVAR5_0486
Byssochlamys spectabilis
PVAR5_0486
N
CAOG_03637
Capsaspora owczarzaki
CAOG_03637
N
Ca_24979
Cicer arietinum
Ca_24979
N
fgenesh1_pg.C_scaffold_4001082
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_4001082
N
CGOC_0000468301
Cylicostephanus goldi
CGOC_0000468301
N
GK18872
Drosophila willistoni
FBgn0220870
N
GE16904
Drosophila yakuba
FBgn0234394
N
Hsal_00106--NA
Harpegnathos saltator
Hsal_00106--NA
N
Lus10042195.g
Linum usitatissimum
Lus10042195.g
N
Lus10019949.g
Linum usitatissimum
Lus10019949.g
N
BLOC1S6
Loxodonta africana
ENSLAFG00000000655
N
fgenesh2_pg.scaffold_12000136
Monosiga brevicollis
fgenesh2_pg.scaffold_12000136
N
OLONG_002570
Oryza longistaminata
OLONG_002570
I
ORUFI11G04600
Oryza rufipogon
ORUFI11G04600
N
ORUFI12G05060
Oryza rufipogon
ORUFI12G05060
N
Pavir.Fa00930
Panicum virgatum
Pavir.Fa00930
N
JL09_g6305
Pichia kudriavzevii
JL09_g6305
N
EFA80760.1
Polysphondylium pallidum
EFA80760.1
N
Sec61g-ps1
Rattus norvegicus
ENSRNOG00000049451
N
Sec61gl
Rattus norvegicus
ENSRNOG00000049016
N
BLOC1S6
Sorex araneus
ENSSARG00000009861
N
TRIUR3_03984
Triticum urartu
TRIUR3_03984
N
TRIUR3_02266
Triticum urartu
TRIUR3_02266
N
ZBAI_00205
Zygosaccharomyces bailii
ZBAI_00205
N