CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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STAT1
(
Oryctolagus cuniculus
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02864 (STAT_bind)
IPR013801
ENSOCUG00000002455
T337570_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STAT1
M08171_2.00
Homo sapiens
HTTCCYRGAAV
BTTCYRGGAAD
ChIP-seq
Mathelier et al.(2014)
MA0137.3
0.928
0.928
STAT1
M08013_2.00
Homo sapiens
NBBNBTTCCHRGAADNSHNNN
NNNDSNHTTCYDGGAAVNVVN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT1_Stanford
0.928
0.928
STAT1
M08014_2.00
Homo sapiens
YTTCCYRGAAR
YTTCYRGGAAR
ChIP-seq
Gerstein et al.(2012)
K562_STAT1_Stanford
0.958
0.958
STAT1
M08229_2.00
Homo sapiens
NTTCYNRGAA
TTCYNRGAAN
ChIP-seq
Contrino et al.(2012)
Mv124
0.958
0.958
STAT1
M08230_2.00
Homo sapiens
RGTTTCRBTT
AAVYGAAACY
ChIP-seq
Contrino et al.(2012)
Mv125
0.928
0.928
STAT1
M09411_2.00
Homo sapiens
HBHNYTTCCNRGAARHSHN
NDSDYTTCYNGGAARNDVD
Misc
Kulakovskiy et al.(2013)
STAT1_HUMAN.H11MO.0.A
0.928
0.928
STAT1
M09642_2.00
Homo sapiens
NHTTCYNRGAADNN
NNHTTCYNRGAADN
Misc
Heinz et al.(2010)
HelaS3-STAT1_GSE12782
0.928
0.928
STAT1
M11348_2.00
Homo sapiens
NSNYAHTTCCSGGAADBBNHV
BDNVVHTTCCSGGAADTRNSN
Transfac
Matys et al.(2006)
V$STAT1_01
0.928
0.928
STAT1
M11349_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_02
0.928
0.928
STAT1
M11350_2.00
Homo sapiens
VNHTTMBN
NVKAADNB
Transfac
Matys et al.(2006)
V$STAT1_03
0.928
0.928
STAT1
M11351_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_05
0.928
0.928
STAT1
M11352_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_07
0.928
0.928
STAT1
M11353_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_Q4
0.928
0.928
STAT1
M11354_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_Q6
0.928
0.928
Stat1
M09422_2.00
Mus musculus
HNDBYNTNDBTTTCHNTTYYYY
RRRRAANDGAAAVHNANRVHND
Misc
Kulakovskiy et al.(2013)
STAT1_MOUSE.H11MO.0.A
0.924
0.924
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000002129
STAT
317
572
FVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVLFDKDVNERNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLEIFVRLQTTSLPLVVISNVSQLPSGWASILWYNMLVAEPRNLSFFLNPPCARWSQLSEVLSWQFSSVTKRGLNGDQLSMLGEKLLGPNAGLDGLIPWTRFCKENISDKNFSFWLWIENILELIK
ENSOCUP00000026612
STAT
317
566
FVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVLFDKDVNERNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPLVVISNVSQLPSGWASILWYNMLVAEPRNLSFFLNPPCARWSQLSEVLSWQFSSVTKRGLNGDQLSMLGEKLLGPNAGLDGLIPWTRFCKENISDKNFSFWLWIENILELIK
Links
Other
STAT
family TFs
Other
Oryctolagus cuniculus
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla013525
Citrullus lanatus
Cla013525
N
0.000
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.000
GLYMA13G41240
Glycine max
GLYMA13G41240
N
0.000
GLYMA15G04173
Glycine max
GLYMA15G04173
N
0.000
Gorai.001G111500
Gossypium raimondii
Gorai.001G111500
N
0.000
Gorai.001G111600
Gossypium raimondii
Gorai.001G111600
N
0.000
Gorai.003G130500
Gossypium raimondii
Gorai.003G130500
N
0.000
POPTR_0009s03800
Populus trichocarpa
POPTR_0009s03800
N
0.000
Pm000719
Prunus mume
Pm000719
N
0.000
PRUPE_ppa002797mg
Prunus persica
PRUPE_ppa002797mg
N
0.000
SapurV1A.0041s0170
Salix purpurea
SapurV1A.0041s0170
N
0.000
Solyc06g076280.1
Solanum lycopersicum
Solyc06g076280.1
N
0.000
TCM_041814
Theobroma cacao
TCM_041814
N
0.000
TCM_041815
Theobroma cacao
TCM_041815
N
0.000