ACOC_0000447501 (Angiostrongylus costaricensis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 ACOC_0000447501 T343395_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.732 0.732
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.732 0.732
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.732 0.732
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.732 0.732
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.732 0.732
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.732 0.732
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.732 0.732
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.732 0.732
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.732 0.732
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.732 0.732
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.709 0.709
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.709 0.709
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0000447501-mRNA-1 TBP 1 43
ACOC_0000447501-mRNA-1 TBP 51 134

Links

Other TBP family TFs
Other Angiostrongylus costaricensis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI003297 Acyrthosiphon pisum ACYPI003297 I
AAEL008417 Aedes aegypti AAEL008417 N
ALNC14_126360 Albugo laibachii ALNC14_126360 N
ANCCAN_29654 Ancylostoma caninum ANCCAN_29654 N
ANCCEY_08672 Ancylostoma ceylanicum ANCCEY_08672 N
ACAC_0000409101 Angiostrongylus cantonensis ACAC_0000409101 N
ACOC_0001323101 Angiostrongylus costaricensis ACOC_0001323101 N
AALB007196 Anopheles albimanus AALB007196 N
AARA009694 Anopheles arabiensis AARA009694 N
AATE006267 Anopheles atroparvus AATE006267 N
ACHR002403 Anopheles christyi ACHR002403 N
ACOM033320 Anopheles coluzzii ACOM033320 N
ACUA003510 Anopheles culicifacies ACUA003510 N
ADAC009894 Anopheles darlingi ADAC009894 N
ADIR002941 Anopheles dirus ADIR002941 N
AEPI008570 Anopheles epiroticus AEPI008570 N
AFAF018499 Anopheles farauti AFAF018499 N
AFUN011346 Anopheles funestus AFUN011346 N
AGAP004110 Anopheles gambiae AGAP004110 N
AMAM021723 Anopheles maculatus AMAM021723 N
AMEC005071 Anopheles melas AMEC005071 N
AMEM002948 Anopheles merus AMEM002948 N
AMIN003838 Anopheles minimus AMIN003838 N
AQUA009805 Anopheles quadriannulatus AQUA009805 N
ASIS023527 Anopheles sinensis ASIS023527 N
ASTEI04275 Anopheles stephensi ASTEI04275 N
GB50764 Apis mellifera GB50764 I
ALUE_0001851001 Ascaris lumbricoides ALUE_0001851001 N
ASU_10445 Ascaris suum ASU_10445 N
ACEP12759 Atta cephalotes ACEP12759 I
BATDEDRAFT_7789 Batrachochytrium dendrobatidis BATDEDRAFT_7789 I
BGIBMGA013514 Bombyx mori BGIBMGA013514 N
estExt_fgenesh2_pg.C_1070085 Branchiostoma floridae estExt_fgenesh2_pg.C_1070085 N
estExt_fgenesh2_pm.C_3240002 Branchiostoma floridae estExt_fgenesh2_pm.C_3240002 N
CBN09380 Caenorhabditis brenneri CBN09380 N
Y73E7A.1 Caenorhabditis elegans WBGene00022268 N
CJA05209 Caenorhabditis japonica CJA05209 N
CRE03905 Caenorhabditis remanei CRE03905 N
Cflo_06133--XP_394373.1_APIME Camponotus floridanus Cflo_06133--XP_394373.1_APIME I
CapteG224864 Capitella teleta CapteG224864 I
fgeneshCV_pg.C_scaffold_2000022 Chlorella vulgaris fgeneshCV_pg.C_scaffold_2000022 N
CLEC002888 Cimex lectularius CLEC002888 N
ENSCING00000023833 Ciona intestinalis ENSCING00000023833 N
fgenesh1_pm.2_#_13 Coccomyxa subellipsoidea C169 fgenesh1_pm.2_#_13 N
CGI_10019404 Crassostrea gigas CGI_10019404 N
CMU_009510 Cryptosporidium muris CMU_009510 N
CpipJ_CPIJ005084 Culex pipiens CpipJ_CPIJ005084 N
CPIJ005084 Culex quinquefasciatus CPIJ005084 N
KGM_20190 Danaus plexippus KGM_20190 I
DAPPUDRAFT_303074 Daphnia pulex DAPPUDRAFT_303074 N
DICVIV_03175 Dictyocaulus viviparus DICVIV_03175 N
DILT_0001250601 Diphyllobothrium latum DILT_0001250601 N
GH18160 Drosophila grimshawi FBgn0125628 I
GK13574 Drosophila willistoni FBgn0215582 I
GE25578 Drosophila yakuba FBgn0242642 I
ETH_00032160 Eimeria tenella ETH_00032160 N
GPUH_0000676401 Gongylonema pulchrum GPUH_0000676401 N
GUITHDRAFT_162866 Guillardia theta GUITHDRAFT_162866 N
HCOI00594600 Haemonchus contortus HCOI00594600 N
HPLM_0000348901 Haemonchus placei HPLM_0000348901 N
HHAL005242-PA Halyomorpha halys HHAL005242-PA I
Hsal_04778--XP_394373.1_APIME Harpegnathos saltator Hsal_04778--XP_394373.1_APIME I
HMEL009197 Heliconius melpomene HMEL009197 N
HPBE_0001252601 Heligmosomoides bakeri HPBE_0001252601 N
HelroG66455 Helobdella robusta HelroG66455 N
ISCW011313 Ixodes scapularis ISCW011313 N
LotgiG126557 Lottia gigantea LotgiG126557 N
LCUP006380 Lucilia cuprina LCUP006380 N
MCINX012524 Melitaea cinxia MCINX012524 I
maker-nMf.1.1.scaf18285-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf18285-snap-gene-0.4 N
MhA1_Contig1250.frz3.gene10 Meloidogyne hapla MhA1_Contig1250.frz3.gene10 N
Minc12734 Meloidogyne incognita Minc12734 N
ML11467a Mnemiopsis leidyi ML11467a N
MDOA001488 Musca domestica MDOA001488 I
NV13812 Nasonia vitripennis NV13812 I
NECAME_12352 Necator americanus NECAME_12352 N
NEMVEDRAFT_v1g201358 Nematostella vectensis NEMVEDRAFT_v1g201358 I
NCLIV_051130 Neospora caninum NCLIV_051130 N
NBR_0000605501 Nippostrongylus brasiliensis NBR_0000605501 N
Ocbimv22013575m.g Octopus bimaculoides Ocbimv22013575m.g I
OESDEN_05486 Oesophagostomum dentatum OESDEN_05486 N
ccdc124 Oryzias latipes ENSORLG00000015728 N
PEQ_0000413701 Parascaris equorum PEQ_0000413701 N
PHUM036320 Pediculus humanus PHUM036320 N
fgenesh1_pg.C_scaffold_73784000001 Phytophthora capsici fgenesh1_pg.C_scaffold_73784000001 N
fgenesh_scip_prom.46568.2049 Phytophthora kernoviae fgenesh_scip_prom.46568.2049 N
fgenesh_scip_prom.28083.7036 Phytophthora lateralis fgenesh_scip_prom.28083.7036 N
F443_19335 Phytophthora parasitica F443_19335 N
Phyra74523 Phytophthora ramorum Phyra74523 N
Physo132366 Phytophthora sojae Physo132366 N
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I
maker-pir_contig_430-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_430-fgenesh-gene-0.3 N
maker-piw_contig_1911-snap-gene-0.6 Pythium iwayamai maker-piw_contig_1911-snap-gene-0.6 N
PYU1_G003004 Pythium ultimum PYU1_G003004 N
maker-pve_contig_105-snap-gene-0.29 Pythium vexans maker-pve_contig_105-snap-gene-0.29 N
RPRC009760 Rhodnius prolixus RPRC009760 N
SPRG_06372 Saprolegnia parasitica SPRG_06372 N
A_06553 Schistosoma haematobium A_06553 N
Sjc_0011880 Schistosoma japonicum Sjc_0011880 N
Smp_004360 Schistosoma mansoni Smp_004360 N
SMRZ_0002114501 Schistosoma margrebowiei SMRZ_0002114501 N
SBAD_0000307901 Soboliphyme baturini SBAD_0000307901 N
SINV12391 Solenopsis invicta SINV12391 I
SPU_001776 Strongylocentrotus purpuratus SPU_001776 N
TELCIR_11967 Teladorsagia circumcincta TELCIR_11967 N
tetur18g00680 Tetranychus urticae tetur18g00680 I
TCLT_0001081001 Thelazia callipaeda TCLT_0001081001 N
TGME49_037260 Toxoplasma gondii TGME49_037260 N
TC004658 Tribolium castaneum TC004658 N
D917_07703 Trichinella nativa D917_07703 N
EFV51436 Trichinella spiralis EFV51436 N
TRE_0001918901 Trichobilharzia regenti TRE_0001918901 N
D918_07944 Trichuris suis D918_07944 N