GSMUA_Achr6G14430_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr6G14430_001 T343975_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.935 0.567
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.933 0.567
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.933 0.529
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.933 0.529
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.933 0.529
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.929 0.567
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.872 0.423
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.870 0.433
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.870 0.433
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.867 0.433
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.845 0.413
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.845 0.413
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.834 0.394
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.831 0.413
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P14430_001 TCP 55 227

Links

Other TCP family TFs
Other Musa acuminata TFs

404 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.000
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.000
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.000
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.000
Bo6g033010 Brassica oleracea Bo6g033010 I 0.000
Bo6g050870 Brassica oleracea Bo6g050870 I 0.000
Bo3g184450 Brassica oleracea Bo3g184450 I 0.000
Bra014370 Brassica rapa Bra014370 I 0.000
Bra037960 Brassica rapa Bra037960 I 0.000
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.000
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.000
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.000
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.000
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.000
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.000
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.000
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.000
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.000
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.000