Pavir.Ca02393 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.Ca02393 T356708_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY3
M07381_2.00 		Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK		 Dap-seq
OMalley et al.(2016)
WRKY3_col_a 		0.859 0.817
Q40090_IPOBA
M11466_2.00 		Ipomoea batatas Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPF1_Q2 		0.856 0.817
WRKY26
M07418_2.00 		Arabidopsis thaliana
MWAAGTCAACGNH
DNCGTTGACTWWK		 Dap-seq
OMalley et al.(2016)
WRKY26_col_a 		0.853 0.772
WRKY26
M07419_2.00 		Arabidopsis thaliana
HMWAGTCAAMR
YKTTGACTWKD		 Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a 		0.853 0.772
PK05432.1
M01324_2.00 		Cannabis sativa
NNRGTCARH
DYTGACYNN		 PBM
Lambert et al.(2019)
pTH11342 		0.853 0.843
WRKY20
M07414_2.00 		Arabidopsis thaliana
HHHRGTCAAMGNH
DNCKTTGACYDDD		 Dap-seq
OMalley et al.(2016)
WRKY20_col_a 		0.852 0.791
WRKY2
M02567_2.00 		Arabidopsis thaliana
BRGTCAAM
KTTGACYV		 PBM
Weirauch et al.(2014)
pTH8832 		0.851 0.791
WRKY33
M02554_2.00 		Arabidopsis thaliana
NNRGTCHDNN
NNHDGACYNN		 PBM
Weirauch et al.(2014)
pTH8183 		0.846 0.791
WRKY33
M07391_2.00 		Arabidopsis thaliana
HWWAGTCAAMD
HKTTGACTWWD		 Dap-seq
OMalley et al.(2016)
WRKY33_col_a 		0.846 0.791
WRKY25
M02552_2.00 		Arabidopsis thaliana
YRGTCAAM
KTTGACYR		 PBM
Weirauch et al.(2014)
pTH8810 		0.840 0.696
WRKY25
M07387_2.00 		Arabidopsis thaliana
HWWRGTCAAMR
YKTTGACYWWD		 Dap-seq
OMalley et al.(2016)
WRKY25_col_a 		0.840 0.696
WRKY25
M07388_2.00 		Arabidopsis thaliana
NNNHWRGTCAACRNH
DNYGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a 		0.840 0.696
ZAP1
M02726_2.00 		Arabidopsis thaliana
DRCKCGGTCAA
TTGACCGMGYH		 SELEX
Mathelier et al.(2014)
MA0589.1 		0.834 0.617
ZAP1
M11463_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_01 		0.834 0.617
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca02393.1.p WRKY 233 289
Pavir.Ca02393.1.p WRKY 390 447
Pavir.Ca02393.2.p WRKY 233 289
Pavir.Ca02393.2.p WRKY 390 446

Links

Other WRKY family TFs
Other Panicum virgatum TFs

783 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g08097 Acanthocheilonema viteae nAv.1.0.1.g08097 I
nAv.1.0.1.g10286 Acanthocheilonema viteae nAv.1.0.1.g10286 I
HR96 Aedes aegypti AAEL007202 I
ANCCAN_15412 Ancylostoma caninum ANCCAN_15412 I
ANCCAN_22289 Ancylostoma caninum ANCCAN_22289 I
ANCCEY_01199 Ancylostoma ceylanicum ANCCEY_01199 I
ANCDUO_17434 Ancylostoma duodenale ANCDUO_17434 I
ACAC_0000565201 Angiostrongylus cantonensis ACAC_0000565201 I
ACAC_0001358501 Angiostrongylus cantonensis ACAC_0001358501 I
ACOC_0000064201 Angiostrongylus costaricensis ACOC_0000064201 I
ASIM_0001146101 Anisakis simplex ASIM_0001146101 I
AALB008395 Anopheles albimanus AALB008395 I
AARA011580 Anopheles arabiensis AARA011580 I
AATE006049 Anopheles atroparvus AATE006049 I
ACOM033140 Anopheles coluzzii ACOM033140 I
ACUA008166 Anopheles culicifacies ACUA008166 I
ADAC003041 Anopheles darlingi ADAC003041 I
ADIR005534 Anopheles dirus ADIR005534 I
AEPI000232 Anopheles epiroticus AEPI000232 I
AFAF019254 Anopheles farauti AFAF019254 I
AFUN010189 Anopheles funestus AFUN010189 I
AGAP004224 Anopheles gambiae AGAP004224 I
AMAM022585 Anopheles maculatus AMAM022585 I
AMEC016766 Anopheles melas AMEC016766 I
AMEM008752 Anopheles merus AMEM008752 I
AMIN004130 Anopheles minimus AMIN004130 I
AQUA008824 Anopheles quadriannulatus AQUA008824 I
ASIS011648 Anopheles sinensis ASIS011648 I
ASTEI03690 Anopheles stephensi ASTEI03690 I
GB52904 Apis mellifera GB52904 I
Afo_R013462 Aptenodytes forsteri Afo_R013462 I
ASU_07898 Ascaris suum ASU_07898 I
ACEP16468 Atta cephalotes ACEP16468 I
BGIBMGA010782 Bombyx mori BGIBMGA010782 I
Bm3787 Brugia malayi Bm3787 I
BXY_1418300 Bursaphelenchus xylophilus BXY_1418300 I
BXY_1432000 Bursaphelenchus xylophilus BXY_1432000 I
CBN06351 Caenorhabditis brenneri CBN06351 I
CBN08904 Caenorhabditis brenneri CBN08904 I
CBN26095 Caenorhabditis brenneri CBN26095 I
CBN31767 Caenorhabditis brenneri CBN31767 I
CBG04512 Caenorhabditis briggsae CBG04512 I
CBG05944 Caenorhabditis briggsae CBG05944 I
CBG07759 Caenorhabditis briggsae CBG07759 I
daf-12 Caenorhabditis elegans WBGene00000908 D
nhr-8 Caenorhabditis elegans WBGene00003607 I
nhr-48 Caenorhabditis elegans WBGene00003638 I
CJA03214 Caenorhabditis japonica CJA03214 I
CJA11532 Caenorhabditis japonica CJA11532 I
CRE05362 Caenorhabditis remanei CRE05362 I
CRE07237 Caenorhabditis remanei CRE07237 I
CRE12534 Caenorhabditis remanei CRE12534 I
CRE19106 Caenorhabditis remanei CRE19106 I
Cflo_03542--XP_624213.2_APIME Camponotus floridanus Cflo_03542--XP_624213.2_APIME I
CLEC000589 Cimex lectularius CLEC000589 I
vdr-a Ciona intestinalis ENSCING00000020740 I
CpipJ_CPIJ016038 Culex pipiens CpipJ_CPIJ016038 I
CPIJ016038 Culex quinquefasciatus CPIJ016038 I
CGOC_0000057501 Cylicostephanus goldi CGOC_0000057501 I
CGOC_0001446101 Cylicostephanus goldi CGOC_0001446101 I
KGM_05575 Danaus plexippus KGM_05575 I
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I
YQE_04331 Dendroctonus ponderosae YQE_04331 I
DICVIV_03942 Dictyocaulus viviparus DICVIV_03942 I
nDi.2.2.2.g04518 Dirofilaria immitis nDi.2.2.2.g04518 I
nDi.2.2.2.g09652 Dirofilaria immitis nDi.2.2.2.g09652 I
DME_0000943901 Dracunculus medinensis DME_0000943901 I
GF16320 Drosophila ananassae FBgn0093341 I
GG11347 Drosophila erecta FBgn0103647 I
Hr96 Drosophila grimshawi FBgn0020174 I
Hr96 Drosophila melanogaster FBgn0015240 D
GI22223 Drosophila mojavensis FBgn0144951 I
GA11197 Drosophila pseudoobscura FBgn0071252 I
GM17786 Drosophila sechellia FBgn0172693 I
GD21158 Drosophila simulans FBgn0192609 I
GJ24344 Drosophila virilis FBgn0211424 I
GK14276 Drosophila willistoni FBgn0216282 I
GE23543 Drosophila yakuba FBgn0240719 I
EEL_0000817201 Elaeophora elaphi EEL_0000817201 I
EVEC_0001257601 Enterobius vermicularis EVEC_0001257601 I
HCOI00283900 Haemonchus contortus HCOI00283900 I
HCOI00567800 Haemonchus contortus HCOI00567800 I
HCOI01526000 Haemonchus contortus HCOI01526000 I
HPLM_0001265101 Haemonchus placei HPLM_0001265101 I
HHAL000201-PA Halyomorpha halys HHAL000201-PA I
Hsal_04850--XP_624213.2_APIME Harpegnathos saltator Hsal_04850--XP_624213.2_APIME I
HMEL016865 Heliconius melpomene HMEL016865 I
HPBE_0001028701 Heligmosomoides bakeri HPBE_0001028701 I
HPBE_0002060301 Heligmosomoides bakeri HPBE_0002060301 I
ISCW009328 Ixodes scapularis ISCW009328 I
LDEC005794 Leptinotarsa decemlineata LDEC005794 I
nLs.2.1.2.g07694 Litomosoides sigmodontis nLs.2.1.2.g07694 I
LOAG_10538 Loa loa LOAG_10538 I
LCUP002913 Lucilia cuprina LCUP002913 I
MCINX005291 Melitaea cinxia MCINX005291 I
MhA1_Contig1158.frz3.gene18 Meloidogyne hapla MhA1_Contig1158.frz3.gene18 I
Minc13296 Meloidogyne incognita Minc13296 I
Minc18589 Meloidogyne incognita Minc18589 I
MDOA002084 Musca domestica MDOA002084 I
NV10187 Nasonia vitripennis NV10187 I
NECAME_01947 Necator americanus NECAME_01947 I
NBR_0000856001 Nippostrongylus brasiliensis NBR_0000856001 I
Ocbimv22029529m.g Octopus bimaculoides Ocbimv22029529m.g I
OFLC_0000598101 Onchocerca flexuosa OFLC_0000598101 I
WBGene00239037 Onchocerca volvulus WBGene00239037 I
PTRK_0001132000 Parastrongyloides trichosuri PTRK_0001132000 I
PTRK_0001378700 Parastrongyloides trichosuri PTRK_0001378700 I
PHUM460970 Pediculus humanus PHUM460970 I
ENSPMAG00000003695 Petromyzon marinus ENSPMAG00000003695 I
PPAI005921 Phlebotomus papatasi PPAI005921 I
scaffold1545-EXSNAP2012.2 Pristionchus exspectatus scaffold1545-EXSNAP2012.2 I
scaffold61-EXSNAP2012.64 Pristionchus exspectatus scaffold61-EXSNAP2012.64 I
Ppa-nhr-48 Pristionchus pacificus PPA20177 I
RSKR_0001015700 Rhabditophanes kr3021 RSKR_0001015700 I
RPRC001794 Rhodnius prolixus RPRC001794 I
L596_g25556 Steinernema carpocapsae L596_g25556 I
L596_g8771 Steinernema carpocapsae L596_g8771 I
L596_g9326 Steinernema carpocapsae L596_g9326 I
L889_g10853 Steinernema feltiae L889_g10853 I
L893_g16225 Steinernema glaseri L893_g16225 I
L893_g3995 Steinernema glaseri L893_g3995 I
L893_g8292 Steinernema glaseri L893_g8292 I
L898_g10498 Steinernema monticolum L898_g10498 I
L898_g1817 Steinernema monticolum L898_g1817 I
L892_g14860 Steinernema scapterisci L892_g14860 I
L892_g18386 Steinernema scapterisci L892_g18386 I
L892_g26350 Steinernema scapterisci L892_g26350 I
SMAR007355 Strigamia maritima SMAR007355 I
SPAL_0000150000 Strongyloides papillosus SPAL_0000150000 I
SPAL_0001591300 Strongyloides papillosus SPAL_0001591300 I
SSTP_0001172300 Strongyloides stercoralis SSTP_0001172300 I
SSTP_0001272200 Strongyloides stercoralis SSTP_0001272200 I
SVE_0958300 Strongyloides venezuelensis SVE_0958300 I
SVE_0996600 Strongyloides venezuelensis SVE_0996600 I
SVUK_0001112701 Strongylus vulgaris SVUK_0001112701 I
SMUV_0001002101 Syphacia muris SMUV_0001002101 I
TELCIR_04193 Teladorsagia circumcincta TELCIR_04193 I
TELCIR_04889 Teladorsagia circumcincta TELCIR_04889 I
TELCIR_05516 Teladorsagia circumcincta TELCIR_05516 I
tetur17g03630 Tetranychus urticae tetur17g03630 I
tetur34g00750 Tetranychus urticae tetur34g00750 I
TCNE_0000258801 Toxocara canis TCNE_0000258801 I
TC010645 Tribolium castaneum TC010645 I
WUBG_12640 Wuchereria bancrofti WUBG_12640 I
WUBG_13334 Wuchereria bancrofti WUBG_13334 I
L798_15710 Zootermopsis nevadensis L798_15710 I