CH063_00417 (Colletotrichum higginsianum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 CH063_00417 T363744_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_09147
M02574_2.00 		Aspergillus nidulans
NNNNHCGGNN
NNCCGDNNNN		 PBM
Weirauch et al.(2014)
pTH8347 		0.562 0.816
NCU02525
M02596_2.00 		Neurospora crassa
NNNNHCGGNN
NNCCGDNNNN		 PBM
Weirauch et al.(2014)
pTH8964 		0.554 0.737
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCF42073 Zinc cluster 129 172

Links

Other Zinc cluster family TFs
Other Colletotrichum higginsianum TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_08186 Aegilops tauschii F775_08186 N 0.000
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.000
BRADI4G43680 Brachypodium distachyon BRADI4G43680 N 0.000
MLOC_73193 Hordeum vulgare MLOC_73193 N 0.000
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.000
OBART03G30260 Oryza barthii OBART03G30260 N 0.000
OB03G37330 Oryza brachyantha OB03G37330 N 0.000
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.000
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.000
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.000
OLONG_013585 Oryza longistaminata OLONG_013585 N 0.000
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.000
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.000
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.000
ORUFI03G31480 Oryza rufipogon ORUFI03G31480 N 0.000
OS03G0690600 Oryza sativa OS03G0690600 N 0.000
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.000
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.000
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N 0.000
Si034417m.g Setaria italica Si034417m.g N 0.000
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
Traes_5BL_C8BEC527F Triticum aestivum Traes_5BL_C8BEC527F N 0.000
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.000
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.000
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.000