estExt_fgenesh1_pg.C_chr_10960 (Mycosphaerella graminicola)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 estExt_fgenesh1_pg.C_chr_10960 T389616_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
col-26
M01428_2.00 		Neurospora crassa
WNNBNCCGD
HCGGNVNNW		 PBM
Lambert et al.(2019)
pTH11852 		0.547 0.769
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_10960 Zinc cluster 39 79

Links

Other Zinc cluster family TFs
Other Mycosphaerella graminicola TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_021_00051 Aquilegia coerulea Aquca_021_00051 I
Aquca_011_00050 Aquilegia coerulea Aquca_011_00050 I
ANAC041 Arabidopsis lyrata fgenesh2_kg.4__1354__AT2G33480.1 I
ANAC083 Arabidopsis lyrata scaffold_601328.1 I
NAC083 Arabidopsis thaliana AT5G13180 D
NAC041 Arabidopsis thaliana AT2G33480 I
Bostr.23794s0753 Boechera stricta Bostr.23794s0753 I
Bostr.2902s0053 Boechera stricta Bostr.2902s0053 I
PK12461.1 Cannabis sativa PK12461.1 I
Cagra.0301s0034 Capsella grandiflora Cagra.0301s0034 N
Cagra.0596s0010 Capsella grandiflora Cagra.0596s0010 I
Carubv10002548m.g Capsella rubella Carubv10002548m.g I
Carubv10023833m.g Capsella rubella Carubv10023833m.g N
evm.TU.supercontig_4.138 Carica papaya evm.TU.supercontig_4.138 N
evm.TU.supercontig_99.63 Carica papaya evm.TU.supercontig_99.63 I
Cla001517 Citrullus lanatus Cla001517 I
Ciclev10032547m.g Citrus clementina Ciclev10032547m.g I
orange1.1g030727m.g Citrus sinensis orange1.1g030727m.g I
Cucsa.349370 Cucumis sativus Cucsa.349370 I
Eucgr.H03387 Eucalyptus grandis Eucgr.H03387 I
Eucgr.B03537 Eucalyptus grandis Eucgr.B03537 I
Thhalv10017152m.g Eutrema salsugineum Thhalv10017152m.g I
gene06460-v1.0-hybrid Fragaria vesca gene06460-v1.0-hybrid N
GLYMA18G53954 Glycine max GLYMA18G53954 I
GLYMA08G47520 Glycine max GLYMA08G47520 I
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I
Gorai.012G125500 Gossypium raimondii Gorai.012G125500 I
Lus10001809.g Linum usitatissimum Lus10001809.g I
Lus10002581.g Linum usitatissimum Lus10002581.g I
chr1.CM0017.80.nc Lotus japonicus chr1.CM0017.80.nc I
MDP0000130686 Malus domestica MDP0000130686 N
MDP0000130123 Malus domestica MDP0000130123 I
MDP0000126517 Malus domestica MDP0000126517 I
cassava37235.valid.m1 Manihot esculenta cassava37235.valid.m1 N
cassava12891.valid.m1 Manihot esculenta cassava12891.valid.m1 I
cassava1138.valid.m1 Manihot esculenta cassava1138.valid.m1 I
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I
POPTR_0012s10530 Populus trichocarpa POPTR_0012s10530 N
POPTR_0015s11420 Populus trichocarpa POPTR_0015s11420 N
POPTR_0001s13380 Populus trichocarpa POPTR_0001s13380 I
Pm007070 Prunus mume Pm007070 I
Pm024558 Prunus mume Pm024558 N
PRUPE_ppa010222mg Prunus persica PRUPE_ppa010222mg I
PRUPE_ppa027024mg Prunus persica PRUPE_ppa027024mg N
30147.m014441 Ricinus communis 30147.m014441 N
30128.m009035 Ricinus communis 30128.m009035 I
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I
SapurV1A.1580s0010 Salix purpurea SapurV1A.1580s0010 N
SapurV1A.1562s0040 Salix purpurea SapurV1A.1562s0040 N
SapurV1A.1562s0030 Salix purpurea SapurV1A.1562s0030 N
SapurV1A.0614s0190 Salix purpurea SapurV1A.0614s0190 N
SapurV1A.0453s0210 Salix purpurea SapurV1A.0453s0210 I
Solyc01g009860.2 Solanum lycopersicum Solyc01g009860.2 N
PGSC0003DMG400011891 Solanum tuberosum PGSC0003DMG400011891 N
TCM_008477 Theobroma cacao TCM_008477 I
TCM_014713 Theobroma cacao TCM_014713 I
ANAC083 Vitis vinifera VIT_01s0146g00280 I