CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
aod-2
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU03352
T390587_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-2
M02599_2.00
Neurospora crassa
NNNNCGGRN
NYCCGNNNN
PBM
Weirauch et al.(2014)
pTH8944
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02599_2.00
Zinc cluster
52
90
HACLYCRRSHMTCDLERPCTRCIKRNIGHLCHDEPRDTE
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU03352
Zinc cluster
52
90
HACLYCRRSHMTCDLERPCTRCIKRNIGHLCHDEPRDTE
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK01612.1
Cannabis sativa
PK01612.1
N
0.000
Ca_16293
Cicer arietinum
Ca_16293
N
0.000
Eucgr.B02328
Eucalyptus grandis
Eucgr.B02328
N
0.000
GLYMA12G06630
Glycine max
GLYMA12G06630
N
0.000
GLYMA11G14670
Glycine max
GLYMA11G14670
N
0.000
chr3.CM0792.420.nd
Lotus japonicus
chr3.CM0792.420.nd
N
0.000
MDP0000194661
Malus domestica
MDP0000194661
N
0.000
cassava34368.m1
Manihot esculenta
cassava34368.m1
N
0.000
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.000
MTR_4g064200
Medicago truncatula
MTR_4g064200
N
0.000
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.000
POPTR_0001s24890
Populus trichocarpa
POPTR_0001s24890
N
0.000
PRUPE_ppa021807mg
Prunus persica
PRUPE_ppa021807mg
N
0.000
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.000
28650.m000186
Ricinus communis
28650.m000186
N
0.000
28650.m000187
Ricinus communis
28650.m000187
N
0.000
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.000
SapurV1A.0041s0200
Salix purpurea
SapurV1A.0041s0200
N
0.000
TCM_041810
Theobroma cacao
TCM_041810
N
0.000