CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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2111_Multiple
(
Saccharomyces bayanus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
2111_Multiple
T390813_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERT1
M00077_2.00
Saccharomyces cerevisiae
NYCGGAAY
RTTCCGRN
PBM
Badis et al.(2008)
YBR239C_2158
0.683
1.000
ERT1
M01572_2.00
Saccharomyces cerevisiae
NNCGGARNN
NNYTCCGNN
PBM
Zhu et al.(2009)
Ybr239c
0.683
1.000
ERT1
M07504_2.00
Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0420.1
0.683
1.000
ERT1
M08646_2.00
Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH
Misc
DeBoer et al.(2011)
YBR239C_564
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
2111_Multiple
Zinc cluster
37
77
VACVNCSRLHVSCEAKRPCLRCISKGLTATCVDAPRKKSKY
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces bayanus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAM021613
Anopheles maculatus
AMAM021613
I
AMAM009961
Anopheles maculatus
AMAM009961
I
BGIBMGA010300
Bombyx mori
BGIBMGA010300
I
BXY_0883500
Bursaphelenchus xylophilus
BXY_0883500
I
POU5F1
Callithrix jacchus
ENSCJAG00000019789
I
Cflo_05860--XP_394134.2_APIME
Camponotus floridanus
Cflo_05860--XP_394134.2_APIME
I
Cmyd_10006628
Chelonia mydas
Cmyd_10006628
I
ENSCING00000013609
Ciona intestinalis
ENSCING00000013609
I
DAPPUDRAFT_9350
Daphnia pulex
DAPPUDRAFT_9350
I
DAPPUDRAFT_9412
Daphnia pulex
DAPPUDRAFT_9412
N
acj6
Drosophila melanogaster
FBgn0000028
D
ECPE_0001547101
Echinostoma caproni
ECPE_0001547101
N
GPUH_0000951201
Gongylonema pulchrum
GPUH_0000951201
I
HelroG138303
Helobdella robusta
HelroG138303
I
POU6F1
Homo sapiens
ENSG00000184271
D
POU2F2
Homo sapiens
ENSG00000028277
D
MESCA009897
Megaselia scalaris
MESCA009897
I
Ogr05710
Ophisaurus gracilis
Ogr05710
I
ENSOANG00000013329
Ornithorhynchus anatinus
ENSOANG00000013329
I
PPAI004106
Phlebotomus papatasi
PPAI004106
I
ENSSHAG00000018562
Sarcophilus harrisii
ENSSHAG00000018562
I
SBAD_0000673901
Soboliphyme baturini
SBAD_0000673901
I
SPER_0000448001
Spirometra erinaceieuropaei
SPER_0000448001
I
L596_g13343
Steinernema carpocapsae
L596_g13343
I
L898_g18190
Steinernema monticolum
L898_g18190
I
EFV49290
Trichinella spiralis
EFV49290
I
L798_02028
Zootermopsis nevadensis
L798_02028
I