PMAA_065570 (Penicillium marneffei)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 PMAA_065570 T392121_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_10120
M01345_2.00 		Aspergillus nidulans
CGGBWWHNNN
NNNDWWVCCG		 PBM
Lambert et al.(2019)
pEX0390 		0.568 0.789
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_065570.t1 Zinc cluster 26 69

Links

Other Zinc cluster family TFs
Other Penicillium marneffei TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_08284 Aegilops tauschii F775_08284 N
F775_08285 Aegilops tauschii F775_08285 N
BRADI2G52227 Brachypodium distachyon BRADI2G52227 N
BRADI4G09180 Brachypodium distachyon BRADI4G09180 N
BRADI4G09190 Brachypodium distachyon BRADI4G09190 N
MLOC_7746 Hordeum vulgare MLOC_7746 N
LPERR11G20420 Leersia perrieri LPERR11G20420 N
OBART11G23680 Oryza barthii OBART11G23680 N
OB11G28100 Oryza brachyantha OB11G28100 N
ORGLA11G0190400 Oryza glaberrima ORGLA11G0190400 N
OGLUM11G22840 Oryza glumaepatula OGLUM11G22840 N
BGIOSGA035743 Oryza indica BGIOSGA035743 N
ONIVA11G23200 Oryza nivara ONIVA11G23200 N
ORUFI11G25560 Oryza rufipogon ORUFI11G25560 N
OS11G0705900 Oryza sativa OS11G0705900 N
Pavir.Ha00317 Panicum virgatum Pavir.Ha00317 N
Pavir.J31658 Panicum virgatum Pavir.J31658 N
Pavir.J39141 Panicum virgatum Pavir.J39141 N
Si026116m.g Setaria italica Si026116m.g N
Sb05g027785 Sorghum bicolor Sb05g027785 N
Traes_4AL_977AF4963 Triticum aestivum Traes_4AL_977AF4963 N
Traes_4AL_B2CACD56E Triticum aestivum Traes_4AL_B2CACD56E N
Traes_4AL_E769BB5A6 Triticum aestivum Traes_4AL_E769BB5A6 N
Traes_4BS_2EA81743E1 Triticum aestivum Traes_4BS_2EA81743E1 N
Traes_4BS_344A932261 Triticum aestivum Traes_4BS_344A932261 N
Traes_4DS_C7C37A73D Triticum aestivum Traes_4DS_C7C37A73D N
TRIUR3_21533 Triticum urartu TRIUR3_21533 N
GRMZM2G073823 Zea mays GRMZM2G073823 N