CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA018034
(
Oryza indica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
BGIOSGA018034
T000624_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA018034-PA
AP2
91
140
MRYRGVRRRRWGKWVSEIRVPGTRERLWLGSYATAEAAAVAHDAAVCLLR
Links
Other
AP2
family TFs
Other
Oryza indica
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA05G17560
Oryza nivara
ONIVA05G17560
N
0.812
ORGLA05G0145800
Oryza glaberrima
ORGLA05G0145800
N
0.812
OS05G0420300
Oryza sativa
OS05G0420300
N
0.812
OPUNC05G14870
Oryza punctata
OPUNC05G14870
N
0.810
LPERR05G13420
Leersia perrieri
LPERR05G13420
N
0.797
BRADI2G25050
Brachypodium distachyon
BRADI2G25050
N
0.763
BGIOSGA004939
Oryza indica
BGIOSGA004939
N
0.755
OB01G48490
Oryza brachyantha
OB01G48490
N
0.755
OGLUM01G43950
Oryza glumaepatula
OGLUM01G43950
N
0.755
OMERI01G36600
Oryza meridionalis
OMERI01G36600
N
0.755
ONIVA01G44590
Oryza nivara
ONIVA01G44590
N
0.755
ORUFI01G43070
Oryza rufipogon
ORUFI01G43070
N
0.755
OS01G0885900
Oryza sativa
OS01G0885900
N
0.755
TRAES3BF106000020CFD_g
Triticum aestivum
TRAES3BF106000020CFD_g
N
0.747
BRADI2G57200
Brachypodium distachyon
BRADI2G57200
N
0.740
OMERI05G14660
Oryza meridionalis
OMERI05G14660
N
0.740
LPERR01G34250
Leersia perrieri
LPERR01G34250
N
0.729
GSMUA_Achr10G04450_001
Musa acuminata
GSMUA_Achr10G04450_001
N
0.725
Sb03g042060
Sorghum bicolor
Sb03g042060
N
0.725
GRMZM2G307152
Zea mays
GRMZM2G307152
N
0.716
GRMZM2G481668
Zea mays
GRMZM2G481668
N
0.716
Sb09g020690
Sorghum bicolor
Sb09g020690
N
0.716
Pavir.J06813
Panicum virgatum
Pavir.J06813
N
0.715
evm.TU.supercontig_21.63
Carica papaya
evm.TU.supercontig_21.63
I
0.688
GSMUA_Achr3G21790_001
Musa acuminata
GSMUA_Achr3G21790_001
N
0.685