evm.TU.supercontig_21.63 (Carica papaya)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 evm.TU.supercontig_21.63 T008285_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF019
M01092_2.00 		Arabidopsis thaliana
CRCCGRCV
BGYCGGYG		 PBM
Lambert et al.(2019)
pTH11534 		0.686 0.760
ERF019
M06571_2.00 		Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a 		0.686 0.760
ERF019
M06572_2.00 		Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g22810_col 		0.686 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_21.63 AP2 21 72

Links

Other AP2 family TFs
Other Carica papaya TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_036224 Theobroma cacao TCM_036224 I 0.770
29938.m000611 Ricinus communis 29938.m000611 I 0.765
cassava8476.m1 Manihot esculenta cassava8476.m1 I 0.763
SapurV1A.3847s0010 Salix purpurea SapurV1A.3847s0010 I 0.762
SapurV1A.4200s0010 Salix purpurea SapurV1A.4200s0010 I 0.762
Cla012182 Citrullus lanatus Cla012182 I 0.760
MTR_5g008790 Medicago truncatula MTR_5g008790 I 0.758
Ca_15055 Cicer arietinum Ca_15055 I 0.753
Lus10006179.g Linum usitatissimum Lus10006179.g I 0.753
POPTR_0013s10420 Populus trichocarpa POPTR_0013s10420 I 0.752
Ciclev10023345m.g Citrus clementina Ciclev10023345m.g I 0.750
orange1.1g045327m.g Citrus sinensis orange1.1g045327m.g I 0.750
Lus10041044.g Linum usitatissimum Lus10041044.g I 0.749
GLYMA11G01700 Glycine max GLYMA11G01700 I 0.744
chr2.CM0018.340.nd Lotus japonicus chr2.CM0018.340.nd I 0.738
SapurV1A.2173s0020 Salix purpurea SapurV1A.2173s0020 I 0.735
POPTR_0019s10220 Populus trichocarpa POPTR_0019s10220 I 0.734
Lus10009468.g Linum usitatissimum Lus10009468.g I 0.730
Cucsa.088640 Cucumis sativus Cucsa.088640 N 0.721
TRAES3BF106000020CFD_g Triticum aestivum TRAES3BF106000020CFD_g N 0.720
GSMUA_Achr10G04450_001 Musa acuminata GSMUA_Achr10G04450_001 N 0.716
OB01G48490 Oryza brachyantha OB01G48490 N 0.714
BGIOSGA004939 Oryza indica BGIOSGA004939 N 0.713
OGLUM01G43950 Oryza glumaepatula OGLUM01G43950 N 0.713
OMERI01G36600 Oryza meridionalis OMERI01G36600 N 0.713
ONIVA01G44590 Oryza nivara ONIVA01G44590 N 0.713
ORUFI01G43070 Oryza rufipogon ORUFI01G43070 N 0.713
OS01G0885900 Oryza sativa OS01G0885900 N 0.713
ERF020 Arabidopsis thaliana AT1G71520 I 0.709
Bostr.10273s0198 Boechera stricta Bostr.10273s0198 I 0.709
Cagra.2418s0007 Capsella grandiflora Cagra.2418s0007 I 0.709
Carubv10022408m.g Capsella rubella Carubv10022408m.g I 0.709
Sb03g042060 Sorghum bicolor Sb03g042060 N 0.708
Bo6g113060 Brassica oleracea Bo6g113060 I 0.703
fgenesh2_kg.2__1411__AT1G71520.1 Arabidopsis lyrata fgenesh2_kg.2__1411__AT1G71520.1 I 0.702
gene27062-v1.0-hybrid Fragaria vesca gene27062-v1.0-hybrid N 0.702
Thhalv10019510m.g Eutrema salsugineum Thhalv10019510m.g I 0.702
mgf010891m Mimulus guttatus mgf010891m I 0.701
Bo5g038890 Brassica oleracea Bo5g038890 I 0.699
Bra012345 Brassica rapa Bra012345 I 0.699
Bra024539 Brassica rapa Bra024539 I 0.699
GRMZM2G307152 Zea mays GRMZM2G307152 N 0.699
GSMUA_Achr3G21790_001 Musa acuminata GSMUA_Achr3G21790_001 N 0.699
Gorai.009G266200 Gossypium raimondii Gorai.009G266200 N 0.698
BRADI2G25050 Brachypodium distachyon BRADI2G25050 N 0.697
MDP0000932292 Malus domestica MDP0000932292 N 0.695
Bo7g057680 Brassica oleracea Bo7g057680 I 0.691
BRADI2G57200 Brachypodium distachyon BRADI2G57200 N 0.691
Thhalv10009842m.g Eutrema salsugineum Thhalv10009842m.g I 0.690
Bo2g072950 Brassica oleracea Bo2g072950 I 0.689
Bra007974 Brassica rapa Bra007974 I 0.689
BGIOSGA018034 Oryza indica BGIOSGA018034 N 0.688
ONIVA05G17560 Oryza nivara ONIVA05G17560 N 0.688
ORGLA05G0145800 Oryza glaberrima ORGLA05G0145800 N 0.688
OS05G0420300 Oryza sativa OS05G0420300 N 0.688
Eucgr.F02967 Eucalyptus grandis Eucgr.F02967 I 0.688
OPUNC05G14870 Oryza punctata OPUNC05G14870 N 0.687
PRUPE_ppa020605mg Prunus persica PRUPE_ppa020605mg N 0.687
Pm004265 Prunus mume Pm004265 N 0.687
ERF019 Arabidopsis thaliana AT1G22810 D 0.686
scaffold_102587.1 Arabidopsis lyrata scaffold_102587.1 I 0.686
Cagra.0114s0023 Capsella grandiflora Cagra.0114s0023 I 0.686
Carubv10011955m.g Capsella rubella Carubv10011955m.g I 0.686
PGSC0003DMG400008734 Solanum tuberosum PGSC0003DMG400008734 N 0.685
Bostr.12659s0135 Boechera stricta Bostr.12659s0135 I 0.685
Pavir.J06813 Panicum virgatum Pavir.J06813 N 0.684
Bra016133 Brassica rapa Bra016133 I 0.681
Aquca_001_00483 Aquilegia coerulea Aquca_001_00483 N 0.681