CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS01G0885900
(
Oryza sativa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OS01G0885900
T004127_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS01T0885900-00
AP2
62
113
CRYRGVRRRRWGKWVSEIRVPGTRERLWLGSYATPEAAAVAHDTAVYFLRGG
Links
Other
AP2
family TFs
Other
Oryza sativa
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA004939
Oryza indica
BGIOSGA004939
N
0.820
OGLUM01G43950
Oryza glumaepatula
OGLUM01G43950
N
0.820
OMERI01G36600
Oryza meridionalis
OMERI01G36600
N
0.820
ONIVA01G44590
Oryza nivara
ONIVA01G44590
N
0.820
ORUFI01G43070
Oryza rufipogon
ORUFI01G43070
N
0.820
OB01G48490
Oryza brachyantha
OB01G48490
N
0.814
TRAES3BF106000020CFD_g
Triticum aestivum
TRAES3BF106000020CFD_g
N
0.813
Sb03g042060
Sorghum bicolor
Sb03g042060
N
0.786
GRMZM2G307152
Zea mays
GRMZM2G307152
N
0.777
BRADI2G57200
Brachypodium distachyon
BRADI2G57200
N
0.773
GSMUA_Achr10G04450_001
Musa acuminata
GSMUA_Achr10G04450_001
N
0.765
OPUNC05G14870
Oryza punctata
OPUNC05G14870
N
0.760
BGIOSGA018034
Oryza indica
BGIOSGA018034
N
0.755
ONIVA05G17560
Oryza nivara
ONIVA05G17560
N
0.755
ORGLA05G0145800
Oryza glaberrima
ORGLA05G0145800
N
0.755
OS05G0420300
Oryza sativa
OS05G0420300
N
0.755
BRADI2G25050
Brachypodium distachyon
BRADI2G25050
N
0.747
LPERR05G13420
Leersia perrieri
LPERR05G13420
N
0.743
LPERR01G34250
Leersia perrieri
LPERR01G34250
N
0.741
OMERI05G14660
Oryza meridionalis
OMERI05G14660
N
0.726
GSMUA_Achr3G21790_001
Musa acuminata
GSMUA_Achr3G21790_001
N
0.725
Pavir.J06813
Panicum virgatum
Pavir.J06813
N
0.714
evm.TU.supercontig_21.63
Carica papaya
evm.TU.supercontig_21.63
I
0.713
29938.m000611
Ricinus communis
29938.m000611
I
0.692
GLYMA11G01700
Glycine max
GLYMA11G01700
I
0.689
Ca_15055
Cicer arietinum
Ca_15055
I
0.687
MTR_5g008790
Medicago truncatula
MTR_5g008790
I
0.682
cassava8476.m1
Manihot esculenta
cassava8476.m1
I
0.682