Bostr.12659s0135 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.12659s0135 T007560_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF019
M01092_2.00 		Arabidopsis thaliana
CRCCGRCV
BGYCGGYG		 PBM
Lambert et al.(2019)
pTH11534 		0.846 0.980
ERF019
M06571_2.00 		Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a 		0.846 0.980
ERF019
M06572_2.00 		Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g22810_col 		0.846 0.980
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.12659s0135.1.p AP2 11 62

Links

Other AP2 family TFs
Other Boechera stricta TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF019 Arabidopsis thaliana AT1G22810 D 0.846
scaffold_102587.1 Arabidopsis lyrata scaffold_102587.1 I 0.846
Cagra.0114s0023 Capsella grandiflora Cagra.0114s0023 I 0.846
Carubv10011955m.g Capsella rubella Carubv10011955m.g I 0.846
Thhalv10009842m.g Eutrema salsugineum Thhalv10009842m.g I 0.838
Bo2g072950 Brassica oleracea Bo2g072950 I 0.837
Bra007974 Brassica rapa Bra007974 I 0.837
Bo5g038890 Brassica oleracea Bo5g038890 I 0.836
Bra012345 Brassica rapa Bra012345 I 0.836
Bra024539 Brassica rapa Bra024539 I 0.836
Bo7g057680 Brassica oleracea Bo7g057680 I 0.829
Bo6g113060 Brassica oleracea Bo6g113060 I 0.827
Thhalv10019510m.g Eutrema salsugineum Thhalv10019510m.g I 0.826
ERF020 Arabidopsis thaliana AT1G71520 I 0.824
Bostr.10273s0198 Boechera stricta Bostr.10273s0198 I 0.824
Cagra.2418s0007 Capsella grandiflora Cagra.2418s0007 I 0.824
Carubv10022408m.g Capsella rubella Carubv10022408m.g I 0.824
fgenesh2_kg.2__1411__AT1G71520.1 Arabidopsis lyrata fgenesh2_kg.2__1411__AT1G71520.1 I 0.817
Bra016133 Brassica rapa Bra016133 I 0.805
TCM_036224 Theobroma cacao TCM_036224 I 0.752
Eucgr.F02967 Eucalyptus grandis Eucgr.F02967 I 0.748
29938.m000611 Ricinus communis 29938.m000611 I 0.712
Ciclev10023345m.g Citrus clementina Ciclev10023345m.g I 0.712
orange1.1g045327m.g Citrus sinensis orange1.1g045327m.g I 0.712
MTR_5g008790 Medicago truncatula MTR_5g008790 I 0.707
POPTR_0013s10420 Populus trichocarpa POPTR_0013s10420 I 0.706
cassava8476.m1 Manihot esculenta cassava8476.m1 I 0.706
SapurV1A.3847s0010 Salix purpurea SapurV1A.3847s0010 I 0.704
SapurV1A.4200s0010 Salix purpurea SapurV1A.4200s0010 I 0.704
Lus10009468.g Linum usitatissimum Lus10009468.g I 0.703
Cla012182 Citrullus lanatus Cla012182 I 0.702
Ca_15055 Cicer arietinum Ca_15055 I 0.699
Lus10041044.g Linum usitatissimum Lus10041044.g I 0.698
chr2.CM0018.340.nd Lotus japonicus chr2.CM0018.340.nd I 0.695
GLYMA11G01700 Glycine max GLYMA11G01700 I 0.692
Lus10006179.g Linum usitatissimum Lus10006179.g I 0.690
mgf010891m Mimulus guttatus mgf010891m I 0.687
evm.TU.supercontig_21.63 Carica papaya evm.TU.supercontig_21.63 I 0.685
SapurV1A.2173s0020 Salix purpurea SapurV1A.2173s0020 I 0.677