OBART02G24860 (Oryza barthii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 OBART02G24860 T019974_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.720 0.720
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G24860.1 B3 65 140

Links

Other B3 family TFs
Other Oryza barthii TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.867
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.867
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.867
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.867
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.867
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.867
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.867
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.867
ARF8 Oryza sativa OS02G0628600 I 0.867
OB02G32150 Oryza brachyantha OB02G32150 I 0.853
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.853
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.847
Si016509m.g Setaria italica Si016509m.g I 0.840
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.827
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.827
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.800
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.773
OBART10G13410 Oryza barthii OBART10G13410 I 0.773
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.773
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.773
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.773
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.773
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.773
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.773
ARF22 Oryza sativa OS10G0479900 I 0.773
27538.m000327 Ricinus communis 27538.m000327 I 0.773
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.773
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.760
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.760
F775_32978 Aegilops tauschii F775_32978 I 0.760
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.760
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.760
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.760
OB06G32920 Oryza brachyantha OB06G32920 I 0.760
OB10G20590 Oryza brachyantha OB10G20590 I 0.760
OBART06G25230 Oryza barthii OBART06G25230 I 0.760
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.760
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.760
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.760
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.760
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.760
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.760
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.760
ARF18 Oryza sativa OS06G0685700 I 0.760
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.760
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.760
Si005991m.g Setaria italica Si005991m.g I 0.760
Si034525m.g Setaria italica Si034525m.g I 0.760
TCM_042067 Theobroma cacao TCM_042067 I 0.760
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.760
Pm031275 Prunus mume Pm031275 I 0.760
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.760
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.760
mgf016139m Mimulus guttatus mgf016139m I 0.760
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.760
MDP0000131481 Malus domestica MDP0000131481 I 0.760
MDP0000221322 Malus domestica MDP0000221322 I 0.760
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.760
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.760
ARF10 Arabidopsis thaliana AT2G28350 I 0.747
Bra011955 Brassica rapa Bra011955 I 0.747
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.747
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.747
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.747
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.747
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.747
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.747
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.747
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.747
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.747
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.747
Ca_02541 Cicer arietinum Ca_02541 I 0.747
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.747
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.747
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.747
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.747
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.747
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.747
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.747
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.747
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.747
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.747
Bo4g071620 Brassica oleracea Bo4g071620 I 0.733
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.733
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.733
GSMUA_Achr5G14630_001 Musa acuminata GSMUA_Achr5G14630_001 N 0.733
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.733
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.733
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.733
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.733
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.733
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.733
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.733
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.733
TCM_043157 Theobroma cacao TCM_043157 I 0.733
Ca_26121 Cicer arietinum Ca_26121 I 0.733
Cla018574 Citrullus lanatus Cla018574 I 0.733
Pm030120 Prunus mume Pm030120 I 0.733
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.733
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.733
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.733
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.733
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.733
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.733
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.733
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.733
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.733
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.733
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.733
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.733
PK17007.1 Cannabis sativa PK17007.1 I 0.733
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.733
ARF16 Arabidopsis thaliana AT4G30080 D 0.720
Bo1g014600 Brassica oleracea Bo1g014600 I 0.720
Bo7g114200 Brassica oleracea Bo7g114200 I 0.720
Bra011162 Brassica rapa Bra011162 I 0.720
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.720
GSMUA_Achr5G18540_001 Musa acuminata GSMUA_Achr5G18540_001 I 0.720
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.720
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.720
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.720
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.720
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.720
TCM_022163 Theobroma cacao TCM_022163 I 0.720
Cla008883 Citrullus lanatus Cla008883 I 0.720
30078.m002329 Ricinus communis 30078.m002329 I 0.720
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.720
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.720
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.720
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.720
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.720
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.720
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.720
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.720
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.720
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.720
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.720
PK13064.1 Cannabis sativa PK13064.1 I 0.720
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.707
Bra024109 Brassica rapa Bra024109 I 0.707
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.707
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.707
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.707
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.707
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.707
Ca_17136 Cicer arietinum Ca_17136 I 0.707
Pm018533 Prunus mume Pm018533 I 0.707
mgf005300m Mimulus guttatus mgf005300m I 0.707
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.707
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.707
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.707
MDP0000750392 Malus domestica MDP0000750392 I 0.707
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.707