LPERR10G09970 (Leersia perrieri)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 LPERR10G09970 T019605_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.897 0.897
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR10G09970.1 B3 140 242
LPERR10G09970.2 B3 140 242

Links

Other B3 family TFs
Other Leersia perrieri TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB10G20590 Oryza brachyantha OB10G20590 I 0.990
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.979
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.979
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.979
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.979
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.979
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.979
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.979
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.979
Si034525m.g Setaria italica Si034525m.g I 0.979
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.979
ARF22 Oryza sativa OS10G0479900 I 0.979
OBART10G13410 Oryza barthii OBART10G13410 I 0.979
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.979
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.969
F775_32978 Aegilops tauschii F775_32978 I 0.969
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.959
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.958
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.948
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.948
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.947
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.938
OB06G32920 Oryza brachyantha OB06G32920 I 0.938
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.938
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.938
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.938
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.938
OBART06G25230 Oryza barthii OBART06G25230 I 0.938
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.938
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.938
MDP0000131481 Malus domestica MDP0000131481 I 0.938
ARF18 Oryza sativa OS06G0685700 I 0.938
MDP0000221322 Malus domestica MDP0000221322 I 0.938
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.938
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.938
Si005991m.g Setaria italica Si005991m.g I 0.938
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.938
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.938
Pm031275 Prunus mume Pm031275 I 0.928
TCM_042067 Theobroma cacao TCM_042067 I 0.928
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.928
TCM_043157 Theobroma cacao TCM_043157 I 0.928
27538.m000327 Ricinus communis 27538.m000327 I 0.928
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.928
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.928
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.928
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.928
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.928
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.928
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.928
Ca_02541 Cicer arietinum Ca_02541 I 0.927
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.918
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.918
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.918
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.918
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.918
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.918
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.918
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.918
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.918
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.918
PK17007.1 Cannabis sativa PK17007.1 I 0.918
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.918
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.918
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.918
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.918
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.918
Cla018574 Citrullus lanatus Cla018574 I 0.918
Pm030120 Prunus mume Pm030120 I 0.918
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.918
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.917
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.917
30078.m002329 Ricinus communis 30078.m002329 I 0.907
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.907
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.907
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.907
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.907
Ca_26121 Cicer arietinum Ca_26121 I 0.907
Bra011162 Brassica rapa Bra011162 I 0.907
PK13064.1 Cannabis sativa PK13064.1 I 0.907
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.907
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.907
TCM_022163 Theobroma cacao TCM_022163 I 0.907
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.907
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.907
Cla008883 Citrullus lanatus Cla008883 I 0.907
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.907
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.907
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.907
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.907
mgf016139m Mimulus guttatus mgf016139m I 0.906
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.906
Si016509m.g Setaria italica Si016509m.g I 0.906
OB02G32150 Oryza brachyantha OB02G32150 I 0.906
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.906
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.897
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.897
Bo7g114200 Brassica oleracea Bo7g114200 I 0.897
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.897
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.897
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.897
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.897
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.897
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.897
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.897
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.897
mgf005300m Mimulus guttatus mgf005300m I 0.897
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.897
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.897
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.897
ARF16 Arabidopsis thaliana AT4G30080 D 0.897
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.897
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.897
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.897
Bo1g014600 Brassica oleracea Bo1g014600 I 0.897
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.897
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.897
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.897
Bo4g071620 Brassica oleracea Bo4g071620 I 0.897
Bra011955 Brassica rapa Bra011955 I 0.896
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.896
ARF10 Arabidopsis thaliana AT2G28350 I 0.896
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.896
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.896
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.887
mgf024607m Mimulus guttatus mgf024607m I 0.887
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.887
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.887
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.887
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.887
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.887
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.887
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.887
MDP0000750392 Malus domestica MDP0000750392 I 0.887
Bra024109 Brassica rapa Bra024109 I 0.887
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.887
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.887
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.887
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.887
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.887
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.887
Pm018533 Prunus mume Pm018533 I 0.887
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.887
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.887
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.887
Ca_17136 Cicer arietinum Ca_17136 I 0.887
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.887
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.887
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.887
ARF8 Oryza sativa OS02G0628600 I 0.887
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.887
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.885
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.885
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.876
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.876
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.876
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.876
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.876
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.876
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.876
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.876
27494.m000045 Ricinus communis 27494.m000045 I 0.876
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.876
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.866
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.866
Cla013979 Citrullus lanatus Cla013979 I 0.866
mgf000336m Mimulus guttatus mgf000336m I 0.866
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.857
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.856
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.856
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.856
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.856
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.845
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.845
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.845
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.845
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.833
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.825
Ca_08488 Cicer arietinum Ca_08488 I 0.813
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.812
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.812
PK13393.1 Cannabis sativa PK13393.1 I 0.806
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.802
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.784
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.784
Si009541m.g Setaria italica Si009541m.g I 0.784
OBART04G18910 Oryza barthii OBART04G18910 I 0.784
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.784
OS04G0519700 Oryza sativa OS04G0519700 I 0.784
ARF10 Oryza indica BGIOSGA016767 I 0.784
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.784
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.784
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.783
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.776
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.765
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.763
OB04G25990 Oryza brachyantha OB04G25990 I 0.763
OBART02G24860 Oryza barthii OBART02G24860 I 0.760
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.750
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.732
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.732
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.732
PK10136.1 Cannabis sativa PK10136.1 I 0.732
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.732
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.730
TCM_035002 Theobroma cacao TCM_035002 I 0.722
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.722
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.722
Cla022413 Citrullus lanatus Cla022413 I 0.722
Pm019126 Prunus mume Pm019126 I 0.722
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.722
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.722
MDP0000256621 Malus domestica MDP0000256621 I 0.722
TCM_029792 Theobroma cacao TCM_029792 I 0.717
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.711
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.711
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.711
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.711
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.711
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.711
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.711
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.704
29908.m005953 Ricinus communis 29908.m005953 I 0.701
Lus10024753.g Linum usitatissimum Lus10024753.g N 0.701
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.701
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.701