LPERR04G15300 (Leersia perrieri)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 LPERR04G15300 T019582_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.835 0.835
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR04G15300.1 B3 133 235
LPERR04G15300.2 B3 133 235

Links

Other B3 family TFs
Other Leersia perrieri TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.887
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.876
OBART04G18910 Oryza barthii OBART04G18910 I 0.876
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.876
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.876
OS04G0519700 Oryza sativa OS04G0519700 I 0.876
ARF10 Oryza indica BGIOSGA016767 I 0.876
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.876
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.865
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.865
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.856
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.856
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.856
Ca_02541 Cicer arietinum Ca_02541 I 0.854
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.848
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.845
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.845
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.845
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.845
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.845
OB06G32920 Oryza brachyantha OB06G32920 I 0.845
Pm018533 Prunus mume Pm018533 I 0.845
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.845
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.845
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.845
Ca_26121 Cicer arietinum Ca_26121 I 0.845
Pm031275 Prunus mume Pm031275 I 0.845
27538.m000327 Ricinus communis 27538.m000327 I 0.845
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.845
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.845
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.845
OBART06G25230 Oryza barthii OBART06G25230 I 0.845
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.845
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.845
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.845
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.845
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.845
MDP0000131481 Malus domestica MDP0000131481 I 0.845
Si005991m.g Setaria italica Si005991m.g I 0.845
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.845
Bra011162 Brassica rapa Bra011162 I 0.845
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.845
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.845
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.845
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.845
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.845
MDP0000221322 Malus domestica MDP0000221322 I 0.845
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.845
ARF18 Oryza sativa OS06G0685700 I 0.845
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.845
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.845
mgf016139m Mimulus guttatus mgf016139m I 0.844
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.844
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.835
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.835
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.835
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.835
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.835
Si034525m.g Setaria italica Si034525m.g I 0.835
TCM_042067 Theobroma cacao TCM_042067 I 0.835
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.835
TCM_043157 Theobroma cacao TCM_043157 I 0.835
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.835
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.835
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.835
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.835
OB04G25990 Oryza brachyantha OB04G25990 I 0.835
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.835
Bra024109 Brassica rapa Bra024109 I 0.835
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.835
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.835
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.835
Bo7g114200 Brassica oleracea Bo7g114200 I 0.835
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.835
ARF10 Arabidopsis thaliana AT2G28350 I 0.835
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.835
ARF16 Arabidopsis thaliana AT4G30080 D 0.835
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.835
Bo1g014600 Brassica oleracea Bo1g014600 I 0.835
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.835
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.835
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.835
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.835
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.835
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.835
mgf005300m Mimulus guttatus mgf005300m I 0.835
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.833
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.825
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.825
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.825
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.825
Pm030120 Prunus mume Pm030120 I 0.825
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.825
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.825
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.825
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.825
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.825
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.825
Cla018574 Citrullus lanatus Cla018574 I 0.825
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.825
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.825
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.825
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.825
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.825
F775_32978 Aegilops tauschii F775_32978 I 0.825
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.825
Bra011955 Brassica rapa Bra011955 I 0.825
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.825
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.825
OB10G20590 Oryza brachyantha OB10G20590 I 0.825
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.825
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.825
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.825
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.825
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.825
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.825
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.825
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.825
Bo4g071620 Brassica oleracea Bo4g071620 I 0.825
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.825
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.823
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.823
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.823
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.814
PK17007.1 Cannabis sativa PK17007.1 I 0.814
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.814
OB02G32150 Oryza brachyantha OB02G32150 I 0.814
PK13064.1 Cannabis sativa PK13064.1 I 0.814
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.814
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.814
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.814
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.814
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.814
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.814
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.814
30078.m002329 Ricinus communis 30078.m002329 I 0.814
mgf024607m Mimulus guttatus mgf024607m I 0.814
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.814
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.814
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.814
OBART10G13410 Oryza barthii OBART10G13410 I 0.814
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.814
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.814
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.814
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.814
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.814
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.814
TCM_022163 Theobroma cacao TCM_022163 I 0.814
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.814
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.814
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.814
Si009541m.g Setaria italica Si009541m.g I 0.814
Si016509m.g Setaria italica Si016509m.g I 0.814
ARF8 Oryza sativa OS02G0628600 I 0.814
ARF22 Oryza sativa OS10G0479900 I 0.814
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.814
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.814
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.814
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.814
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.814
Cla013979 Citrullus lanatus Cla013979 I 0.814
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.814
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.814
27494.m000045 Ricinus communis 27494.m000045 I 0.814
Ca_17136 Cicer arietinum Ca_17136 I 0.814
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.811
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.804
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.804
MDP0000750392 Malus domestica MDP0000750392 I 0.804
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.804
Cla008883 Citrullus lanatus Cla008883 I 0.804
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.804
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.804
mgf000336m Mimulus guttatus mgf000336m I 0.794
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.794
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.794
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.794
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.784
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.784
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.784
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.784
PK13393.1 Cannabis sativa PK13393.1 I 0.773
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.773
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.773
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.773
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.773
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.773
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.773
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.764
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.763
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.753
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.745
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.742
TCM_035002 Theobroma cacao TCM_035002 I 0.742
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.742
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.742
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.732
Ca_08488 Cicer arietinum Ca_08488 I 0.722
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.722
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.722
TCM_029792 Theobroma cacao TCM_029792 I 0.717
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.711
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.711
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.711
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.711
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.711
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.711
29908.m005953 Ricinus communis 29908.m005953 I 0.711
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.711
Pm019126 Prunus mume Pm019126 I 0.711
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.711
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.704
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.701
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.701
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.701
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.701
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.701
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.701