BRADI5G15904 (Brachypodium distachyon)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 BRADI5G15904 T019019_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.720 0.720
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G15904.1 B3 126 233

Links

Other B3 family TFs
Other Brachypodium distachyon TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.820
PK13393.1 Cannabis sativa PK13393.1 I 0.790
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.781
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.781
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.773
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.763
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.763
Ca_02541 Cicer arietinum Ca_02541 I 0.760
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.760
27494.m000045 Ricinus communis 27494.m000045 I 0.760
mgf016139m Mimulus guttatus mgf016139m I 0.760
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.755
Pm018533 Prunus mume Pm018533 I 0.753
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.753
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.750
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.750
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.750
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.750
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.750
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.750
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.742
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.742
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.742
MDP0000221322 Malus domestica MDP0000221322 I 0.742
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.742
MDP0000131481 Malus domestica MDP0000131481 I 0.742
Bo1g014600 Brassica oleracea Bo1g014600 I 0.742
Bra024109 Brassica rapa Bra024109 I 0.742
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.742
PK13064.1 Cannabis sativa PK13064.1 I 0.742
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.742
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.740
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.740
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.740
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.740
Ca_26121 Cicer arietinum Ca_26121 I 0.740
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.740
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.740
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.740
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.740
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.740
Si009541m.g Setaria italica Si009541m.g I 0.740
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.740
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.740
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.740
TCM_043157 Theobroma cacao TCM_043157 I 0.740
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.732
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.732
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.732
mgf024607m Mimulus guttatus mgf024607m I 0.730
mgf000336m Mimulus guttatus mgf000336m I 0.730
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.730
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.730
Bra011162 Brassica rapa Bra011162 I 0.730
Si016509m.g Setaria italica Si016509m.g I 0.730
Si034525m.g Setaria italica Si034525m.g I 0.730
Ca_17136 Cicer arietinum Ca_17136 I 0.730
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.730
Cla008883 Citrullus lanatus Cla008883 I 0.730
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.730
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.730
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.730
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.730
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.730
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.730
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.730
OB02G32150 Oryza brachyantha OB02G32150 I 0.730
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.730
OB10G20590 Oryza brachyantha OB10G20590 I 0.730
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.730
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.730
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.726
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.724
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.722
MDP0000750392 Malus domestica MDP0000750392 I 0.722
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.722
Bo7g114200 Brassica oleracea Bo7g114200 I 0.720
Cla018574 Citrullus lanatus Cla018574 I 0.720
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.720
PK17007.1 Cannabis sativa PK17007.1 I 0.720
TCM_042067 Theobroma cacao TCM_042067 I 0.720
PK10136.1 Cannabis sativa PK10136.1 I 0.720
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.720
Pm030120 Prunus mume Pm030120 I 0.720
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.720
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.720
27538.m000327 Ricinus communis 27538.m000327 I 0.720
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.720
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.720
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.720
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.720
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.720
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.720
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.720
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.720
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.720
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.720
ARF16 Arabidopsis thaliana AT4G30080 D 0.720
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.720
Bo4g071620 Brassica oleracea Bo4g071620 I 0.720
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.720
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.720
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.720
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.720
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.720
Pm031275 Prunus mume Pm031275 I 0.720
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.720
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.720
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.720
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.720
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.720
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.720
ARF8 Oryza sativa OS02G0628600 I 0.720
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.720
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.720
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.720
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.720
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.720
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.720
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.720
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.720
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.720
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.720
OBART10G13410 Oryza barthii OBART10G13410 I 0.720
F775_32978 Aegilops tauschii F775_32978 I 0.720
ARF22 Oryza sativa OS10G0479900 I 0.720
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.720
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.720
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.720
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.720
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.720
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.720
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.720
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.720
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.711
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.710
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.710
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.710
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.710
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.710
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.710
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.710
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.710
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.710
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.710
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.710
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.710
ARF10 Arabidopsis thaliana AT2G28350 I 0.710
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.710
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.710
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.710
TCM_022163 Theobroma cacao TCM_022163 I 0.710
mgf005300m Mimulus guttatus mgf005300m I 0.710
Bra011955 Brassica rapa Bra011955 I 0.710
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.710
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.710
30078.m002329 Ricinus communis 30078.m002329 I 0.710
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.710
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.710
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.710
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.710
Cla013979 Citrullus lanatus Cla013979 I 0.710
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.710
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.710
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.710
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.710
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.700
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.700
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.700
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.700
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.700
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.700
Si005991m.g Setaria italica Si005991m.g I 0.700
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.700
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.700
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.700
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.700
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.700
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.700
OS04G0519700 Oryza sativa OS04G0519700 I 0.700
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.700
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.700
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.700
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.700
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.700
OBART06G25230 Oryza barthii OBART06G25230 I 0.700
OBART04G18910 Oryza barthii OBART04G18910 I 0.700
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.700
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.700
ARF18 Oryza sativa OS06G0685700 I 0.700
ARF10 Oryza indica BGIOSGA016767 I 0.700
OB06G32920 Oryza brachyantha OB06G32920 I 0.700