Eucgr.F04380 (Eucalyptus grandis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Eucgr.F04380 T023058_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F04380.1 B3 94 196

Links

Other B3 family TFs
Other Eucalyptus grandis TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.837
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.816
GLYMA13G02410 Glycine max GLYMA13G02410 N 0.806
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.806
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.796
Pm019126 Prunus mume Pm019126 I 0.796
MDP0000232116 Malus domestica MDP0000232116 N 0.796
ARF17 Arabidopsis thaliana AT1G77850 N 0.794
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N 0.786
Bo6g081980 Brassica oleracea Bo6g081980 N 0.784
Bra003665 Brassica rapa Bra003665 N 0.784
MDP0000256621 Malus domestica MDP0000256621 I 0.784
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.776
ARF17 Arabidopsis lyrata scaffold_202748.1 N 0.776
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.776
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.776
Ca_11175 Cicer arietinum Ca_11175 N 0.768
Bo6g121520 Brassica oleracea Bo6g121520 N 0.765
Bra015651 Brassica rapa Bra015651 N 0.765
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.765
Cla022413 Citrullus lanatus Cla022413 I 0.765
TCM_035002 Theobroma cacao TCM_035002 I 0.763
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.755
PGSC0003DMG400027798 Solanum tuberosum PGSC0003DMG400027798 N 0.755
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.755
29908.m005953 Ricinus communis 29908.m005953 I 0.755
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.755
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.755
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.755
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.755
Lus10024753.g Linum usitatissimum Lus10024753.g N 0.755
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.755
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I 0.755
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.755
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.745
Solyc11g013480.1 Solanum lycopersicum Solyc11g013480.1 N 0.745
PK13393.1 Cannabis sativa PK13393.1 I 0.745
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.742
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.735
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.735
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.735
Lus10024754.g Linum usitatissimum Lus10024754.g N 0.735
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.729
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.724
ARF16 Arabidopsis thaliana AT4G30080 D 0.724
Bo7g114200 Brassica oleracea Bo7g114200 I 0.724
Bra011162 Brassica rapa Bra011162 I 0.724
Bra024109 Brassica rapa Bra024109 I 0.724
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.724
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.724
OB06G32920 Oryza brachyantha OB06G32920 I 0.724
OBART06G25230 Oryza barthii OBART06G25230 I 0.724
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.724
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.724
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.724
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.724
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.724
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.724
ARF18 Oryza sativa OS06G0685700 I 0.724
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.724
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.724
Sb06g033970 Sorghum bicolor Sb06g033970 N 0.724
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.724
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.724
Si005991m.g Setaria italica Si005991m.g I 0.724
Si021833m.g Setaria italica Si021833m.g N 0.724
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.724
mgf000336m Mimulus guttatus mgf000336m I 0.724
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.724
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.724
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.724
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.724
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.724
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.724
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.724
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.714
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.714
Bo1g014600 Brassica oleracea Bo1g014600 I 0.714
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.714
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.714
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.714
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.714
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.714
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.714
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.714
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.714
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.714
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.714
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.714
OPUNC04G28180 Oryza punctata OPUNC04G28180 N 0.714
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.714
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.714
ARF8 Oryza sativa OS02G0628600 I 0.714
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.714
Si016509m.g Setaria italica Si016509m.g I 0.714
TCM_043157 Theobroma cacao TCM_043157 I 0.714
Traes_2AL_C70217249 Triticum aestivum Traes_2AL_C70217249 N 0.714
Cla008883 Citrullus lanatus Cla008883 I 0.714
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.714
mgf005300m Mimulus guttatus mgf005300m I 0.714
mgf016139m Mimulus guttatus mgf016139m I 0.714
mgf024607m Mimulus guttatus mgf024607m I 0.714
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.714
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.714
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.714
gene16050-v1.0-hybrid Fragaria vesca gene16050-v1.0-hybrid N 0.714
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.714
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.714
MDP0000131481 Malus domestica MDP0000131481 I 0.714
MDP0000221322 Malus domestica MDP0000221322 I 0.714
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.714
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.714
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.711
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.711
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.708
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.708
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.708
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.704
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.704
BRADI5G27400 Brachypodium distachyon BRADI5G27400 N 0.704
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.704
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.704
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.704
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.704
GRMZM5G808366 Zea mays GRMZM5G808366 N 0.704
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.704
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.704
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.704
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.704
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.704
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.704
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.704
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.704
OB02G32150 Oryza brachyantha OB02G32150 I 0.704
OB10G20590 Oryza brachyantha OB10G20590 I 0.704
OBART10G13410 Oryza barthii OBART10G13410 I 0.704
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.704
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.704
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.704
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.704
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.704
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.704
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.704
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.704
ARF22 Oryza sativa OS10G0479900 I 0.704
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.704
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.704
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.704
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.704
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.704
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.704
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.704
Si034525m.g Setaria italica Si034525m.g I 0.704
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.704
TCM_042067 Theobroma cacao TCM_042067 I 0.704
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.704
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.704
Ca_02541 Cicer arietinum Ca_02541 I 0.704
Ca_14329 Cicer arietinum Ca_14329 N 0.704
Ca_26121 Cicer arietinum Ca_26121 I 0.704
Cla018574 Citrullus lanatus Cla018574 I 0.704
Pm018533 Prunus mume Pm018533 I 0.704
Pm030120 Prunus mume Pm030120 I 0.704
Pm031275 Prunus mume Pm031275 I 0.704
27538.m000327 Ricinus communis 27538.m000327 I 0.704
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.704
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.704
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.704
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.704
Cagra.0096s0050 Capsella grandiflora Cagra.0096s0050 N 0.704
Carubv10019991m.g Capsella rubella Carubv10019991m.g N 0.704
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.704
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.704
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.704
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.704
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.704
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.704
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.704
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.704
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.704
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.704
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.704
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.704
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.704
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.704
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.704
PK17007.1 Cannabis sativa PK17007.1 I 0.704
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.701