LPERR06G21020 (Leersia perrieri)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 LPERR06G21020 T019596_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.876 0.876
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR06G21020.1 B3 194 296

Links

Other B3 family TFs
Other Leersia perrieri TFs

223 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.969
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.947
Cla008883 Citrullus lanatus Cla008883 I 0.938
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.938
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.928
OB06G32920 Oryza brachyantha OB06G32920 I 0.928
OBART06G25230 Oryza barthii OBART06G25230 I 0.928
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.928
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.928
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.928
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.928
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.928
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.928
ARF18 Oryza sativa OS06G0685700 I 0.928
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.928
Si005991m.g Setaria italica Si005991m.g I 0.928
27494.m000045 Ricinus communis 27494.m000045 I 0.928
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.928
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.918
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.918
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.918
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.918
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.918
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.907
OBART10G13410 Oryza barthii OBART10G13410 I 0.907
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.907
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.907
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.907
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.907
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.907
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.907
ARF22 Oryza sativa OS10G0479900 I 0.907
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.897
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.897
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.897
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.897
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.897
OB10G20590 Oryza brachyantha OB10G20590 I 0.897
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.897
Si034525m.g Setaria italica Si034525m.g I 0.897
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.897
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.897
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.897
MDP0000131481 Malus domestica MDP0000131481 I 0.897
MDP0000221322 Malus domestica MDP0000221322 I 0.897
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.897
F775_32978 Aegilops tauschii F775_32978 I 0.887
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.887
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.887
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.887
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.887
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.887
Pm031275 Prunus mume Pm031275 I 0.887
27538.m000327 Ricinus communis 27538.m000327 I 0.887
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.887
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.887
Ca_02541 Cicer arietinum Ca_02541 I 0.885
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.885
ARF16 Arabidopsis thaliana AT4G30080 D 0.876
Bo7g114200 Brassica oleracea Bo7g114200 I 0.876
Bra011162 Brassica rapa Bra011162 I 0.876
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.876
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.876
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.876
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.876
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.876
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.876
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.876
TCM_042067 Theobroma cacao TCM_042067 I 0.876
Cla018574 Citrullus lanatus Cla018574 I 0.876
Pm030120 Prunus mume Pm030120 I 0.876
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.876
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.876
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.876
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.876
mgf005300m Mimulus guttatus mgf005300m I 0.876
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.876
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.876
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.876
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.876
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.876
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.876
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.876
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.876
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.876
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.876
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.875
OB02G32150 Oryza brachyantha OB02G32150 I 0.875
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.875
Si016509m.g Setaria italica Si016509m.g I 0.875
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.875
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.874
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.866
Bo1g014600 Brassica oleracea Bo1g014600 I 0.866
Bra024109 Brassica rapa Bra024109 I 0.866
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.866
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.866
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.866
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.866
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.866
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.866
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.866
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.866
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.866
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.866
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.866
ARF8 Oryza sativa OS02G0628600 I 0.866
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.866
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.866
TCM_022163 Theobroma cacao TCM_022163 I 0.866
TCM_043157 Theobroma cacao TCM_043157 I 0.866
30078.m002329 Ricinus communis 30078.m002329 I 0.866
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.866
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.866
PK17007.1 Cannabis sativa PK17007.1 I 0.866
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.866
ARF10 Arabidopsis thaliana AT2G28350 I 0.865
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.865
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.865
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.865
mgf016139m Mimulus guttatus mgf016139m I 0.865
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.856
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.856
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.856
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.856
Ca_26121 Cicer arietinum Ca_26121 I 0.856
Pm018533 Prunus mume Pm018533 I 0.856
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.856
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.856
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.856
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.856
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.856
PK13064.1 Cannabis sativa PK13064.1 I 0.856
Bo4g071620 Brassica oleracea Bo4g071620 I 0.854
Bra011955 Brassica rapa Bra011955 I 0.854
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.854
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.854
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.854
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.854
PK13393.1 Cannabis sativa PK13393.1 I 0.847
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.845
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.845
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.845
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.845
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.845
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.845
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.845
mgf024607m Mimulus guttatus mgf024607m I 0.845
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.845
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.845
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.845
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.845
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.845
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.845
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.845
MDP0000750392 Malus domestica MDP0000750392 I 0.845
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.845
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.845
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.845
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.845
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.835
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.835
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.835
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.835
Ca_17136 Cicer arietinum Ca_17136 I 0.835
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.835
mgf000336m Mimulus guttatus mgf000336m I 0.835
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.835
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.835
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.825
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.825
Cla013979 Citrullus lanatus Cla013979 I 0.825
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.814
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.814
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.814
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.797
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.796
ARF10 Oryza indica BGIOSGA016767 I 0.794
OBART04G18910 Oryza barthii OBART04G18910 I 0.794
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.794
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.794
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.794
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.794
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.794
OS04G0519700 Oryza sativa OS04G0519700 I 0.794
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.794
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.794
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.792
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.792
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.792
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.792
OB09G15010 Oryza brachyantha OB09G15010 N 0.784
PK10136.1 Cannabis sativa PK10136.1 I 0.773
Ca_08488 Cicer arietinum Ca_08488 I 0.769
Si009541m.g Setaria italica Si009541m.g I 0.763
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.761
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.755
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.753
OB04G25990 Oryza brachyantha OB04G25990 I 0.742
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.742
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.735
Pm019126 Prunus mume Pm019126 I 0.732
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.732
MDP0000256621 Malus domestica MDP0000256621 I 0.732
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.722
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.722
Cla022413 Citrullus lanatus Cla022413 I 0.722
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.722
OBART02G24860 Oryza barthii OBART02G24860 I 0.720
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.714
TCM_035002 Theobroma cacao TCM_035002 I 0.711
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.711
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.711
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.711
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.711
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.710
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.701
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.701
29908.m005953 Ricinus communis 29908.m005953 I 0.701
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.701
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.701
Lus10024753.g Linum usitatissimum Lus10024753.g N 0.701
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.701