SELMODRAFT_444549 (Selaginella moellendorffii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 SELMODRAFT_444549 T021234_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ18315 B3 137 239

Links

Other B3 family TFs
Other Selaginella moellendorffii TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 1.000
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.958
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.934
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.928
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.917
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.897
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.897
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.896
OB10G20590 Oryza brachyantha OB10G20590 I 0.896
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.896
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.896
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.887
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.887
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.887
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.887
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.887
Si034525m.g Setaria italica Si034525m.g I 0.887
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.885
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.885
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.885
Ca_02541 Cicer arietinum Ca_02541 I 0.885
F775_32978 Aegilops tauschii F775_32978 I 0.885
27538.m000327 Ricinus communis 27538.m000327 I 0.885
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.876
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.876
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.876
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.876
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.876
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.876
Pm030120 Prunus mume Pm030120 I 0.876
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.876
OBART10G13410 Oryza barthii OBART10G13410 I 0.876
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.876
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.876
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.876
Cla018574 Citrullus lanatus Cla018574 I 0.876
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.876
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.876
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.876
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.876
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.876
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.876
MDP0000221322 Malus domestica MDP0000221322 I 0.876
MDP0000131481 Malus domestica MDP0000131481 I 0.876
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.876
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.876
ARF22 Oryza sativa OS10G0479900 I 0.876
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.875
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.875
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.875
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.875
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.866
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.866
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.866
Si005991m.g Setaria italica Si005991m.g I 0.866
ARF18 Oryza sativa OS06G0685700 I 0.866
Pm031275 Prunus mume Pm031275 I 0.866
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.866
30078.m002329 Ricinus communis 30078.m002329 I 0.866
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.866
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.866
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.866
TCM_022163 Theobroma cacao TCM_022163 I 0.866
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.866
OBART06G25230 Oryza barthii OBART06G25230 I 0.866
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.866
OB06G32920 Oryza brachyantha OB06G32920 I 0.866
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.866
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.866
PK17007.1 Cannabis sativa PK17007.1 I 0.866
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.866
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.866
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.866
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.866
mgf005300m Mimulus guttatus mgf005300m I 0.866
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.865
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.865
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.865
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.865
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.865
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.865
ARF10 Arabidopsis thaliana AT2G28350 I 0.865
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.865
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.863
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.856
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.856
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.856
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.856
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.856
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.856
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.856
TCM_042067 Theobroma cacao TCM_042067 I 0.856
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.856
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.856
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.856
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.856
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.854
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.854
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.854
mgf016139m Mimulus guttatus mgf016139m I 0.854
TCM_043157 Theobroma cacao TCM_043157 I 0.854
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.854
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.854
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.854
Si016509m.g Setaria italica Si016509m.g I 0.854
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.854
Bo4g071620 Brassica oleracea Bo4g071620 I 0.854
OB02G32150 Oryza brachyantha OB02G32150 I 0.854
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.854
Cla008883 Citrullus lanatus Cla008883 I 0.845
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.845
MDP0000750392 Malus domestica MDP0000750392 I 0.845
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.845
Cla013979 Citrullus lanatus Cla013979 I 0.845
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.845
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.845
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.845
Ca_26121 Cicer arietinum Ca_26121 I 0.845
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.845
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.845
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.845
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.845
Bra011955 Brassica rapa Bra011955 I 0.844
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.844
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.844
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.844
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.844
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.844
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.844
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.844
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.844
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.844
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.844
ARF8 Oryza sativa OS02G0628600 I 0.844
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.844
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.844
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.844
Bo7g114200 Brassica oleracea Bo7g114200 I 0.844
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.844
mgf024607m Mimulus guttatus mgf024607m I 0.835
Bra011162 Brassica rapa Bra011162 I 0.835
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.835
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.835
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.835
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.835
Pm018533 Prunus mume Pm018533 I 0.835
Ca_17136 Cicer arietinum Ca_17136 I 0.835
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.835
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.835
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.833
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.833
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.833
27494.m000045 Ricinus communis 27494.m000045 I 0.833
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.833
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.833
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.833
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.833
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.833
ARF16 Arabidopsis thaliana AT4G30080 D 0.833
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.833
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.825
Bra024109 Brassica rapa Bra024109 I 0.825
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.825
Bo1g014600 Brassica oleracea Bo1g014600 I 0.825
PK13064.1 Cannabis sativa PK13064.1 I 0.825
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.825
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.825
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.814
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.814
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.812
mgf000336m Mimulus guttatus mgf000336m I 0.812
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.806
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.804
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.802
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.794
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.794
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.783
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.773
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.771
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.771
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.771
Ca_08488 Cicer arietinum Ca_08488 I 0.769
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.764
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.760
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.760
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.760
ARF10 Oryza indica BGIOSGA016767 I 0.760
OS04G0519700 Oryza sativa OS04G0519700 I 0.760
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.760
OBART04G18910 Oryza barthii OBART04G18910 I 0.760
PK13393.1 Cannabis sativa PK13393.1 I 0.755
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.753
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.745
Cla022413 Citrullus lanatus Cla022413 I 0.742
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.735
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.729
Pm019126 Prunus mume Pm019126 I 0.722
Si009541m.g Setaria italica Si009541m.g I 0.722
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.722
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.722
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.719
OB04G25990 Oryza brachyantha OB04G25990 I 0.719
TCM_029792 Theobroma cacao TCM_029792 I 0.717
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.717
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.711
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.711
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.708
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.708
PK10136.1 Cannabis sativa PK10136.1 I 0.708
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.701
MDP0000256621 Malus domestica MDP0000256621 I 0.701