MTR_7g101275 (Medicago truncatula)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 MTR_7g101275 T019864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH24016 B3 92 194

Links

Other B3 family TFs
Other Medicago truncatula TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.835
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.835
MTR_0041s0120 Medicago truncatula MTR_0041s0120 I 0.833
Ca_02541 Cicer arietinum Ca_02541 I 0.771
Ca_26121 Cicer arietinum Ca_26121 I 0.763
MDP0000750392 Malus domestica MDP0000750392 I 0.763
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.763
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.760
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.760
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.760
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.753
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.753
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.753
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.753
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.753
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.753
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.753
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.753
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.753
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.753
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.753
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.753
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.753
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.753
Pm030120 Prunus mume Pm030120 I 0.753
Cla018574 Citrullus lanatus Cla018574 I 0.753
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.753
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.753
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.753
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.750
TCM_043157 Theobroma cacao TCM_043157 I 0.750
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.750
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.750
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.750
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.750
Pm031275 Prunus mume Pm031275 I 0.742
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.742
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.742
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.742
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.742
Ca_17136 Cicer arietinum Ca_17136 I 0.742
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.742
30078.m002329 Ricinus communis 30078.m002329 I 0.742
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.742
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.742
mgf024607m Mimulus guttatus mgf024607m I 0.742
mgf005300m Mimulus guttatus mgf005300m I 0.742
TCM_022163 Theobroma cacao TCM_022163 I 0.742
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.742
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.742
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.742
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.742
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.742
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.742
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.742
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.742
Bo1g014600 Brassica oleracea Bo1g014600 I 0.742
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.742
MDP0000221322 Malus domestica MDP0000221322 I 0.742
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.742
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.742
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.742
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.742
PK17007.1 Cannabis sativa PK17007.1 I 0.742
MDP0000131481 Malus domestica MDP0000131481 I 0.742
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.742
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.742
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.742
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.742
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.742
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.740
Bo4g071620 Brassica oleracea Bo4g071620 I 0.740
mgf016139m Mimulus guttatus mgf016139m I 0.740
ARF10 Arabidopsis thaliana AT2G28350 I 0.740
27538.m000327 Ricinus communis 27538.m000327 I 0.740
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.740
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.740
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.732
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.732
Si034525m.g Setaria italica Si034525m.g I 0.732
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.732
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.732
TCM_042067 Theobroma cacao TCM_042067 I 0.732
Bra011162 Brassica rapa Bra011162 I 0.732
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.732
Pm018533 Prunus mume Pm018533 I 0.732
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.732
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.732
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.732
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.732
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.732
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.732
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.732
OB02G32150 Oryza brachyantha OB02G32150 I 0.729
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.729
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.729
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.729
Bra011955 Brassica rapa Bra011955 I 0.729
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.729
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.729
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.729
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.729
F775_32978 Aegilops tauschii F775_32978 I 0.729
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.729
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.722
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.722
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.722
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.722
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.722
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.722
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.722
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.722
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.722
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.722
OB10G20590 Oryza brachyantha OB10G20590 I 0.722
OB06G32920 Oryza brachyantha OB06G32920 I 0.722
ARF18 Oryza sativa OS06G0685700 I 0.722
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.722
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.722
OBART06G25230 Oryza barthii OBART06G25230 I 0.722
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.722
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.722
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.722
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.722
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.722
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.722
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.722
ARF16 Arabidopsis thaliana AT4G30080 D 0.722
Cla013979 Citrullus lanatus Cla013979 I 0.722
Si005991m.g Setaria italica Si005991m.g I 0.722
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.722
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.722
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.722
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.719
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.719
27494.m000045 Ricinus communis 27494.m000045 I 0.719
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.719
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.719
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.719
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.719
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.719
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.719
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.719
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.719
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.719
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.719
ARF8 Oryza sativa OS02G0628600 I 0.719
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.719
Si016509m.g Setaria italica Si016509m.g I 0.719
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.719
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.719
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.711
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.711
Bo7g114200 Brassica oleracea Bo7g114200 I 0.711
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.711
Bra024109 Brassica rapa Bra024109 I 0.711
ARF22 Oryza sativa OS10G0479900 I 0.711
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.711
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.711
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.711
OBART10G13410 Oryza barthii OBART10G13410 I 0.711
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.711
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.711
Ca_17624 Cicer arietinum Ca_17624 I 0.711
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.708
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.708
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.708
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.708
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.708
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.705
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.704
Ca_08488 Cicer arietinum Ca_08488 I 0.703