PK10136.1 (Cannabis sativa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PK10136.1 T024331_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK10136.1 B3 143 245

Links

Other B3 family TFs
Other Cannabis sativa TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK13393.1 Cannabis sativa PK13393.1 I 0.776
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.776
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.773
Cla008883 Citrullus lanatus Cla008883 I 0.773
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.773
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.765
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.763
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.763
27494.m000045 Ricinus communis 27494.m000045 I 0.755
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.753
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.753
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.745
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.745
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.742
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.742
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.742
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.742
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.732
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.732
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.732
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.732
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.732
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.732
OB06G32920 Oryza brachyantha OB06G32920 I 0.732
OBART06G25230 Oryza barthii OBART06G25230 I 0.732
OBART10G13410 Oryza barthii OBART10G13410 I 0.732
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.732
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.732
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.732
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.732
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.732
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.732
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.732
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.732
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.732
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.732
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.732
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.732
ARF18 Oryza sativa OS06G0685700 I 0.732
ARF22 Oryza sativa OS10G0479900 I 0.732
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.732
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.732
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.732
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.732
Si005991m.g Setaria italica Si005991m.g I 0.732
Si034525m.g Setaria italica Si034525m.g I 0.732
MDP0000131481 Malus domestica MDP0000131481 I 0.732
MDP0000221322 Malus domestica MDP0000221322 I 0.732
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.732
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.732
F775_32978 Aegilops tauschii F775_32978 I 0.729
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.729
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.729
Si016509m.g Setaria italica Si016509m.g I 0.729
Ca_02541 Cicer arietinum Ca_02541 I 0.729
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.729
OB10G20590 Oryza brachyantha OB10G20590 I 0.724
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.724
ARF16 Arabidopsis thaliana AT4G30080 D 0.722
Bra011162 Brassica rapa Bra011162 I 0.722
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.722
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.722
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.722
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.722
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.722
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.722
TCM_042067 Theobroma cacao TCM_042067 I 0.722
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.722
Cla018574 Citrullus lanatus Cla018574 I 0.722
Pm030120 Prunus mume Pm030120 I 0.722
Pm031275 Prunus mume Pm031275 I 0.722
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.722
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.722
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.722
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.722
mgf005300m Mimulus guttatus mgf005300m I 0.722
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.722
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.722
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.722
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.722
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.722
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.722
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.722
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.722
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.722
MDP0000750392 Malus domestica MDP0000750392 I 0.722
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.722
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.722
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.722
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.722
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.722
PK17007.1 Cannabis sativa PK17007.1 I 0.722
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.720
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.719
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.719
OB02G32150 Oryza brachyantha OB02G32150 I 0.719
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.719
mgf016139m Mimulus guttatus mgf016139m I 0.719
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.719
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.719
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.716
Bo7g114200 Brassica oleracea Bo7g114200 I 0.714
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.714
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.714
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.714
TCM_043157 Theobroma cacao TCM_043157 I 0.714
27538.m000327 Ricinus communis 27538.m000327 I 0.714
Bo1g014600 Brassica oleracea Bo1g014600 I 0.711
Bra024109 Brassica rapa Bra024109 I 0.711
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.711
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.711
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.711
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.711
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.711
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.711
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.711
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.711
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.711
TCM_022163 Theobroma cacao TCM_022163 I 0.711
30078.m002329 Ricinus communis 30078.m002329 I 0.711
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.711
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.711
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.711
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.711
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.711
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.711
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.711
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.711
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.708
ARF10 Arabidopsis thaliana AT2G28350 I 0.708
Bo4g071620 Brassica oleracea Bo4g071620 I 0.708
Bra011955 Brassica rapa Bra011955 I 0.708
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.708
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.708
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.708
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.708
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.708
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.708
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.708
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.708
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.704
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.704
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.704
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.704
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.704
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.704
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.704
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.704
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.704
ARF8 Oryza sativa OS02G0628600 I 0.704
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.704
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.704
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.701
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.701
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.701
Ca_17136 Cicer arietinum Ca_17136 I 0.701
Ca_26121 Cicer arietinum Ca_26121 I 0.701
Pm018533 Prunus mume Pm018533 I 0.701
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.701
mgf024607m Mimulus guttatus mgf024607m I 0.701
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.701
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.701
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.701
PK13064.1 Cannabis sativa PK13064.1 I 0.701