SapurV1A.0010s0540 (Salix purpurea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 SapurV1A.0010s0540 T024007_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0010s0540.1.p B3 127 229
SapurV1A.0010s0540.2.p B3 127 229
SapurV1A.0010s0540.3.p B3 127 229
SapurV1A.0010s0540.4.p B3 127 229

Links

Other B3 family TFs
Other Salix purpurea TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.979
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.948
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.948
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.938
29908.m005953 Ricinus communis 29908.m005953 I 0.897
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.866
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.856
MDP0000256621 Malus domestica MDP0000256621 I 0.856
TCM_035002 Theobroma cacao TCM_035002 I 0.845
Pm019126 Prunus mume Pm019126 I 0.845
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.845
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.835
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.825
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.825
Lus10024754.g Linum usitatissimum Lus10024754.g N 0.814
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.814
Cagra.0096s0050 Capsella grandiflora Cagra.0096s0050 N 0.804
Carubv10019991m.g Capsella rubella Carubv10019991m.g N 0.804
gene16050-v1.0-hybrid Fragaria vesca gene16050-v1.0-hybrid N 0.804
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.804
Lus10024753.g Linum usitatissimum Lus10024753.g N 0.804
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.794
ARF17 Arabidopsis thaliana AT1G77850 N 0.784
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N 0.784
Bo6g081980 Brassica oleracea Bo6g081980 N 0.773
Bra003665 Brassica rapa Bra003665 N 0.773
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.773
Cla022413 Citrullus lanatus Cla022413 I 0.773
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.773
ARF17 Arabidopsis lyrata scaffold_202748.1 N 0.763
Cagra.24523s0002 Capsella grandiflora Cagra.24523s0002 N 0.760
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.755
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.755
MDP0000232116 Malus domestica MDP0000232116 N 0.755
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.753
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.724
Bo6g121520 Brassica oleracea Bo6g121520 N 0.722
Bra015651 Brassica rapa Bra015651 N 0.722
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.722
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.722
Bo4g071620 Brassica oleracea Bo4g071620 I 0.719
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.714
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.711
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.711
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.711
Ca_26121 Cicer arietinum Ca_26121 I 0.711
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.711
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.711
ARF10 Arabidopsis thaliana AT2G28350 I 0.708
Bra011955 Brassica rapa Bra011955 I 0.708
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.708
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.708
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.708
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.708
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.708
GLYMA13G02410 Glycine max GLYMA13G02410 N 0.704
Solyc11g013480.1 Solanum lycopersicum Solyc11g013480.1 N 0.704
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.701
ARF16 Arabidopsis thaliana AT4G30080 D 0.701
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.701
Bo1g014600 Brassica oleracea Bo1g014600 I 0.701
Bo7g114200 Brassica oleracea Bo7g114200 I 0.701
Bra011162 Brassica rapa Bra011162 I 0.701
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.701
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.701
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.701
OB06G32920 Oryza brachyantha OB06G32920 I 0.701
OBART06G25230 Oryza barthii OBART06G25230 I 0.701
OBART10G13410 Oryza barthii OBART10G13410 I 0.701
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.701
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.701
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.701
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.701
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.701
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.701
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.701
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.701
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.701
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.701
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.701
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.701
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.701
ARF18 Oryza sativa OS06G0685700 I 0.701
ARF22 Oryza sativa OS10G0479900 I 0.701
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.701
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.701
Si005991m.g Setaria italica Si005991m.g I 0.701
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.701
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.701
mgf000336m Mimulus guttatus mgf000336m I 0.701
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.701
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.701
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.701
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.701
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.701
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.701