Thhalv10002435m.g (Eutrema salsugineum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Thhalv10002435m.g T028714_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002435m BED ZF 28 79

Links

Other BED ZF family TFs
Other Eutrema salsugineum TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g137780 Brassica oleracea Bo4g137780 N 0.932
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.886
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.886
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.886
MDP0000197332 Malus domestica MDP0000197332 N 0.864
MDP0000394762 Malus domestica MDP0000394762 N 0.864
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.864
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.864
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.841
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.841
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.841
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.841
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.841
PK27100.1 Cannabis sativa PK27100.1 N 0.818
mgf025287m Mimulus guttatus mgf025287m N 0.818
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.818
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.818
TCM_038144 Theobroma cacao TCM_038144 N 0.818
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.818
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.818
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.818
Gorai.010G061600 Gossypium raimondii Gorai.010G061600 N 0.818
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N 0.818
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.795
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.795
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 0.795
Bo6g018310 Brassica oleracea Bo6g018310 N 0.795
HAT Arabidopsis thaliana AT3G42170 N 0.795
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.795
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.795
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.795
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.773
Cucsa.036140 Cucumis sativus Cucsa.036140 N 0.773
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N 0.773
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.767
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.727
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.727
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.705
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.705
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.705
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.705
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.705
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.705
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.705
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.705
OB08G27850 Oryza brachyantha OB08G27850 N 0.705
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.705
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.705
Si034159m.g Setaria italica Si034159m.g N 0.705
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.705
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.705
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.705
Lus10032337.g Linum usitatissimum Lus10032337.g N 0.705