CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000286589
(
Malus domestica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
MDP0000286589
T050424_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000286589
bHLH
508
555
DPHSIAERLRREKISDRMKNLQELVPKSNRTDKASMLDEIIEYVRFLQ
Links
Other
bHLH
family TFs
Other
Malus domestica
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM5G839518
Zea mays
GRMZM5G839518
I
0.884
Sb04g023320
Sorghum bicolor
Sb04g023320
I
0.884
Si016939m.g
Setaria italica
Si016939m.g
I
0.884
Pavir.Aa01634
Panicum virgatum
Pavir.Aa01634
I
0.884
Pavir.Ab02747
Panicum virgatum
Pavir.Ab02747
I
0.884
BRADI3G46200
Brachypodium distachyon
BRADI3G46200
I
0.871
PRUPE_ppa017709mg
Prunus persica
PRUPE_ppa017709mg
I
0.864
Pm027004
Prunus mume
Pm027004
I
0.864
BGIOSGA006236
Oryza indica
BGIOSGA006236
I
0.859
GRMZM2G024530
Zea mays
GRMZM2G024530
I
0.859
GRMZM2G116785
Zea mays
GRMZM2G116785
I
0.859
OB02G28530
Oryza brachyantha
OB02G28530
I
0.859
OBART02G20940
Oryza barthii
OBART02G20940
I
0.859
OGLUM02G21200
Oryza glumaepatula
OGLUM02G21200
I
0.859
OLONG_025501
Oryza longistaminata
OLONG_025501
I
0.859
OMERI02G20700
Oryza meridionalis
OMERI02G20700
I
0.859
ONIVA02G23040
Oryza nivara
ONIVA02G23040
I
0.859
OPUNC02G18940
Oryza punctata
OPUNC02G18940
I
0.859
ORGLA02G0180000
Oryza glaberrima
ORGLA02G0180000
I
0.859
ORUFI02G21960
Oryza rufipogon
ORUFI02G21960
I
0.859
OS02G0564700
Oryza sativa
OS02G0564700
I
0.859
Sb10g006250
Sorghum bicolor
Sb10g006250
I
0.859
Si006332m.g
Setaria italica
Si006332m.g
I
0.859
Pavir.Db01966
Panicum virgatum
Pavir.Db01966
I
0.859
Pavir.J15280
Panicum virgatum
Pavir.J15280
I
0.859
AMTR_s00129p00124210
Amborella trichopoda
AMTR_s00129p00124210
I
0.851
GSMUA_Achr3G10120_001
Musa acuminata
GSMUA_Achr3G10120_001
I
0.851
GSMUA_Achr9G18080_001
Musa acuminata
GSMUA_Achr9G18080_001
I
0.851
SELMODRAFT_425336
Selaginella moellendorffii
SELMODRAFT_425336
I
0.851
TCM_037455
Theobroma cacao
TCM_037455
I
0.851
VIT_11s0016g00380
Vitis vinifera
VIT_11s0016g00380
I
0.851
cassava19894.m1
Manihot esculenta
cassava19894.m1
I
0.851
Aquca_020_00579
Aquilegia coerulea
Aquca_020_00579
I
0.851
Ciclev10008008m.g
Citrus clementina
Ciclev10008008m.g
I
0.851
evm.TU.supercontig_82.59
Carica papaya
evm.TU.supercontig_82.59
I
0.851
Gorai.009G038500
Gossypium raimondii
Gorai.009G038500
I
0.851
orange1.1g010045m.g
Citrus sinensis
orange1.1g010045m.g
I
0.851
PK08539.1
Cannabis sativa
PK08539.1
I
0.849
Gorai.012G031100
Gossypium raimondii
Gorai.012G031100
I
0.839
BGIOSGA021743
Oryza indica
BGIOSGA021743
I
0.838
LPERR06G05570
Leersia perrieri
LPERR06G05570
I
0.838
OBART06G06000
Oryza barthii
OBART06G06000
I
0.838
OGLUM06G06280
Oryza glumaepatula
OGLUM06G06280
I
0.838
OLONG_013313
Oryza longistaminata
OLONG_013313
I
0.838
OMERI06G07190
Oryza meridionalis
OMERI06G07190
I
0.838
ONIVA06G06960
Oryza nivara
ONIVA06G06960
I
0.838
OPUNC06G05770
Oryza punctata
OPUNC06G05770
I
0.838
ORUFI06G06220
Oryza rufipogon
ORUFI06G06220
I
0.838
OS06G0193400
Oryza sativa
OS06G0193400
I
0.838
POPTR_0006s13790
Populus trichocarpa
POPTR_0006s13790
I
0.838
29739.m003684
Ricinus communis
29739.m003684
I
0.838
cassava10497.m1
Manihot esculenta
cassava10497.m1
I
0.838
SapurV1A.0249s0140
Salix purpurea
SapurV1A.0249s0140
I
0.838