Thhalv10021177m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10021177m.g T051266_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH34
M01704_2.00 		Arabidopsis thaliana
VCACGYGH
DCRCGTGB		 PBM
Weirauch et al.(2014)
pTH7212 		0.859 0.846
BHLH34
M06734_2.00 		Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN
NGDCACGTGBNNNNHNNDNNN		 Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a 		0.859 0.846
BHLH34
M06735_2.00 		Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN
NNNNNNNNVCACGTGNNNNNYWY		 Dap-seq
OMalley et al.(2016)
bHLH34_col 		0.859 0.846
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10021177m bHLH 160 211

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc10g006510.2 Solanum lycopersicum Solyc10g006510.2 I 0.868
TCM_020866 Theobroma cacao TCM_020866 I 0.863
Gorai.011G172500 Gossypium raimondii Gorai.011G172500 I 0.863
BHLH34 Arabidopsis thaliana AT3G23210 D 0.859
bHLH34 Arabidopsis lyrata fgenesh2_kg.3__2536__AT3G23210.1 I 0.859
Eucgr.K00871 Eucalyptus grandis Eucgr.K00871 N 0.840