TCM_020866 (Theobroma cacao)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 TCM_020866 T045394_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH34
M01704_2.00 		Arabidopsis thaliana
VCACGYGH
DCRCGTGB		 PBM
Weirauch et al.(2014)
pTH7212 		0.843 0.769
BHLH34
M06734_2.00 		Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN
NGDCACGTGBNNNNHNNDNNN		 Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a 		0.843 0.769
BHLH34
M06735_2.00 		Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN
NNNNNNNNVCACGTGNNNNNYWY		 Dap-seq
OMalley et al.(2016)
bHLH34_col 		0.843 0.769
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY06012 bHLH 65 116
EOY06013 bHLH 62 112

Links

Other bHLH family TFs
Other Theobroma cacao TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.011G172500 Gossypium raimondii Gorai.011G172500 I 0.879
Eucgr.K00871 Eucalyptus grandis Eucgr.K00871 N 0.866
Thhalv10021177m.g Eutrema salsugineum Thhalv10021177m.g I 0.863
AMTR_s00009p00175450 Amborella trichopoda AMTR_s00009p00175450 I 0.856
Solyc10g006510.2 Solanum lycopersicum Solyc10g006510.2 I 0.852
BHLH34 Arabidopsis thaliana AT3G23210 D 0.843
bHLH34 Arabidopsis lyrata fgenesh2_kg.3__2536__AT3G23210.1 I 0.843
Solyc07g064040.2 Solanum lycopersicum Solyc07g064040.2 I 0.843
mgf012088m Mimulus guttatus mgf012088m I 0.843
Gorai.002G081900 Gossypium raimondii Gorai.002G081900 I 0.843
Gorai.013G164100 Gossypium raimondii Gorai.013G164100 I 0.843