CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM16
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000018965
T087960_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.824
0.982
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.824
0.982
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.824
0.982
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000025245
C2H2 ZF
85
106
FRCDACDELFPSKLDLRRHKKY
ENSBTAP00000025245
C2H2 ZF
138
160
HECKDCERMFPTKYSLEQHMVVH
ENSBTAP00000025245
C2H2 ZF
166
188
YKCDQCPKAFNWKSNLIRHQMSH
ENSBTAP00000025245
C2H2 ZF
194
217
FECENCVKVFTDPSNLQRHIRSQH
ENSBTAP00000025245
C2H2 ZF
223
245
HACPDCGKTFATSSGLKQHKHIH
ENSBTAP00000025245
C2H2 ZF
251
273
FICEVCHKSYTQFSNLCRHKRMH
ENSBTAP00000025245
C2H2 ZF
280
301
IKCKDCGQMFSTTSSLNKHRRF
ENSBTAP00000025245
C2H2 ZF
806
828
YTCRYCGKIFPRSANLTRHLRTH
ENSBTAP00000025245
C2H2 ZF
834
857
YRCKYCDRSFSISSNLQRHVRNIH
ENSBTAP00000025245
C2H2 ZF
863
885
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSP00000417899-D2
Bos grunniens
ENSP00000417899-D2
I
0.827
PRDM16
Gorilla gorilla
ENSGGOG00000003763
I
0.824
PRDM16
Macaca mulatta
ENSMMUG00000009350
I
0.824
ENSP00000270722
Macaca fascicularis
ENSP00000270722
I
0.824
PRDM16
Homo sapiens
ENSG00000142611
D
0.824
ENSPPYG00000001968
Pongo abelii
ENSPPYG00000001968
I
0.824
PRDM16
Otolemur garnettii
ENSOGAG00000005055
I
0.824
PRDM16
Equus caballus
ENSECAG00000017045
I
0.824
Gfo_R009744
Geospiza fortis
Gfo_R009744
I
0.823
ENSAPLG00000005898
Anas platyrhynchos
ENSAPLG00000005898
I
0.823
Brh_R007819
Buceros rhinoceros
Brh_R007819
I
0.823
Alligator_sinensis_CCG011602.1
Alligator sinensis
Alligator_sinensis_CCG011602.1
I
0.823
ENSGALG00000001063
Gallus gallus
ENSGALG00000001063
I
0.823
Afo_R003306
Aptenodytes forsteri
Afo_R003306
I
0.823
PRDM16
Meleagris gallopavo
ENSMGAG00000001857
I
0.823
PRDM16
Loxodonta africana
ENSLAFG00000001071
I
0.822
PRDM16
Canis familiaris
ENSCAFG00000019473
I
0.822
ENSPSIG00000004093
Pelodiscus sinensis
ENSPSIG00000004093
I
0.821
XP_002938538
Xenopus tropicalis
XP_002938538
I
0.821
PRDM16
Sus scrofa
ENSSSCG00000021490
I
0.819
ENSLOCG00000005336
Lepisosteus oculatus
ENSLOCG00000005336
I
0.810
ENSFALG00000009580
Ficedula albicollis
ENSFALG00000009580
I
0.801
Aan_R005955
Calypte anna
Aan_R005955
I
0.801
Ogr15306
Ophisaurus gracilis
Ogr15306
I
0.798
PRDM16
Danio rerio
ENSDARG00000078324
I
0.780
ENSGMOG00000015664
Gadus morhua
ENSGMOG00000015664
I
0.778
ENSAMXG00000014024
Astyanax mexicanus
ENSAMXG00000014024
I
0.777
ENSXMAG00000019072
Xiphophorus maculatus
ENSXMAG00000019072
I
0.774
si:ch211-263k4.2
Oryzias latipes
ENSORLG00000004492
I
0.774
si:ch211-263k4.2
Gasterosteus aculeatus
ENSGACG00000006600
I
0.774
ENSPFOG00000010341
Poecilia formosa
ENSPFOG00000010341
I
0.774
ENSONIG00000002121
Oreochromis niloticus
ENSONIG00000002121
I
0.769