CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GH24554
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0132010
T115485_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
peb
M06067_2.00
Drosophila melanogaster
KGATGCT
AGCATCM
B1H
Zhu et al.(2011)
peb-F1-3_SANGER_2.5_FBgn0003053
0.823
0.978
peb
M03582_2.00
Drosophila melanogaster
YGGWCCA
TGGWCCR
SELEX
Ming et al.(2013)
CB1
0.823
0.978
peb
M03583_2.00
Drosophila melanogaster
GGATGCTGYK
MRCAGCATCC
SELEX
Ming et al.(2013)
CB2
0.823
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0158460
C2H2 ZF
226
248
YLCPICEVVSATPHEFTNHIRCH
FBpp0158460
C2H2 ZF
258
280
FTCRICSKVLSSASSLDRHVLVH
FBpp0158460
C2H2 ZF
286
308
FNCRYCHLNFTTNGNMHRHMRTH
FBpp0158460
C2H2 ZF
706
728
FPCKLCTAVFPNLRALKGHNRYH
FBpp0158460
C2H2 ZF
738
760
FRCNMCPYAVCDKAALVRHMRTH
FBpp0158460
C2H2 ZF
766
789
YECAVCNYAFTTKANCERHLRNRH
FBpp0158460
C2H2 ZF
1742
1763
ICAFCVRRFWSTEDLRRHMRTH
FBpp0158460
C2H2 ZF
1769
1791
FQCEICLRKFTLKHSMLRHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA11481
Drosophila pseudoobscura
FBgn0071532
I
0.825
peb
Drosophila melanogaster
FBgn0003053
D
0.823
GE16354
Drosophila yakuba
FBgn0233884
I
0.823
GJ15926
Drosophila virilis
FBgn0203113
I
0.819
GK16116
Drosophila willistoni
FBgn0218118
I
0.819
GF19359
Drosophila ananassae
FBgn0096369
I
0.817
GG18715
Drosophila erecta
FBgn0110924
I
0.817
GI16234
Drosophila mojavensis
FBgn0138983
I
0.815
LCUP006491
Lucilia cuprina
LCUP006491
I
0.771
LLOJ000532
Lutzomyia longipalpis
LLOJ000532
I
0.768