CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LLOJ000532
(
Lutzomyia longipalpis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LLOJ000532
T150889_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
peb
M06067_2.00
Drosophila melanogaster
KGATGCT
AGCATCM
B1H
Zhu et al.(2011)
peb-F1-3_SANGER_2.5_FBgn0003053
0.769
0.874
peb
M03582_2.00
Drosophila melanogaster
YGGWCCA
TGGWCCR
SELEX
Ming et al.(2013)
CB1
0.769
0.874
peb
M03583_2.00
Drosophila melanogaster
GGATGCTGYK
MRCAGCATCC
SELEX
Ming et al.(2013)
CB2
0.769
0.874
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LLOJ000532-PA
C2H2 ZF
172
194
YFCPICNSLLDTQHEFTEHIRSH
LLOJ000532-PA
C2H2 ZF
203
225
FTCRICSKVLSSASSLDRHVLVH
LLOJ000532-PA
C2H2 ZF
231
253
FTCKYCHVTFTTNGNMHRHMRTH
LLOJ000532-PA
C2H2 ZF
589
611
FPCKLCTAVFPNLRALKGHNRIH
LLOJ000532-PA
C2H2 ZF
620
642
YRCNMCPYTIHDKAALIRHMRTH
LLOJ000532-PA
C2H2 ZF
648
671
YECAMCNYAFTTKANCERHLRNRH
LLOJ000532-PA
C2H2 ZF
1498
1519
ICAFCMRRFWSTEDLRRHMRTH
LLOJ000532-PA
C2H2 ZF
1525
1547
FQCDVCQRKFTLKHSMLRHQKKH
Links
Other
C2H2 ZF
family TFs
Other
Lutzomyia longipalpis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
peb
Drosophila melanogaster
FBgn0003053
D
0.769
GE16354
Drosophila yakuba
FBgn0233884
I
0.769
GA11481
Drosophila pseudoobscura
FBgn0071532
I
0.768
GF19359
Drosophila ananassae
FBgn0096369
I
0.768
GH24554
Drosophila grimshawi
FBgn0132010
I
0.768
GJ15926
Drosophila virilis
FBgn0203113
I
0.768
GK16116
Drosophila willistoni
FBgn0218118
I
0.768
GI16234
Drosophila mojavensis
FBgn0138983
I
0.767
GG18715
Drosophila erecta
FBgn0110924
I
0.763
TC009560
Tribolium castaneum
TC009560
N
0.763
LDEC015716
Leptinotarsa decemlineata
LDEC015716
N
0.759