CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GE16354
(
Drosophila yakuba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0233884
T116981_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
peb
M06067_2.00
Drosophila melanogaster
KGATGCT
AGCATCM
B1H
Zhu et al.(2011)
peb-F1-3_SANGER_2.5_FBgn0003053
0.827
0.989
peb
M03582_2.00
Drosophila melanogaster
YGGWCCA
TGGWCCR
SELEX
Ming et al.(2013)
CB1
0.827
0.989
peb
M03583_2.00
Drosophila melanogaster
GGATGCTGYK
MRCAGCATCC
SELEX
Ming et al.(2013)
CB2
0.827
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0261364
C2H2 ZF
245
267
YLCPICEVVSATPHEFTNHIRCH
FBpp0261364
C2H2 ZF
277
299
FTCRICSKVLSSASSLDRHVLVH
FBpp0261364
C2H2 ZF
305
327
FNCRYCHLTFTTNGNMHRHMRTH
FBpp0261364
C2H2 ZF
707
729
FPCKLCAAVFPNLRALKGHNRVH
FBpp0261364
C2H2 ZF
739
761
FRCNMCPYAVCDKAALVRHMRTH
FBpp0261364
C2H2 ZF
767
790
YECAVCNYAFTTKANCERHLRNRH
FBpp0261364
C2H2 ZF
1700
1721
ICAFCVRRFWSTEDLRRHMRTH
FBpp0261364
C2H2 ZF
1727
1749
FQCDICLRKFTLKHSMLRHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila yakuba
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
peb
Drosophila melanogaster
FBgn0003053
D
0.827
GA11481
Drosophila pseudoobscura
FBgn0071532
I
0.826
GH24554
Drosophila grimshawi
FBgn0132010
I
0.823
GG18715
Drosophila erecta
FBgn0110924
I
0.821
GJ15926
Drosophila virilis
FBgn0203113
I
0.820
GK16116
Drosophila willistoni
FBgn0218118
I
0.820
GI16234
Drosophila mojavensis
FBgn0138983
I
0.819
GF19359
Drosophila ananassae
FBgn0096369
I
0.818
LCUP006491
Lucilia cuprina
LCUP006491
I
0.772
LLOJ000532
Lutzomyia longipalpis
LLOJ000532
I
0.769