OB11G27850 (Oryza brachyantha)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OB11G27850 T124606_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB11G27850.1 C2H2 ZF 46 68
OB11G27850.1 C2H2 ZF 84 106

Links

Other C2H2 ZF family TFs
Other Oryza brachyantha TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA033523 Oryza indica BGIOSGA033523 N 0.826
BGIOSGA033525 Oryza indica BGIOSGA033525 N 0.826
OS11G0702300 Oryza sativa OS11G0702300 N 0.826
Pavir.Da01393 Panicum virgatum Pavir.Da01393 I 0.782
Pavir.Ha00193 Panicum virgatum Pavir.Ha00193 I 0.782
Pavir.Hb00023 Panicum virgatum Pavir.Hb00023 I 0.782
LjSGA_020980.2 Lotus japonicus LjSGA_020980.2 I 0.769
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I 0.765
Bo7g117320 Brassica oleracea Bo7g117320 I 0.764
Si003051m.g Setaria italica Si003051m.g I 0.762
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.761
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.761
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.761
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.761
GSMUA_Achr10G13530_001 Musa acuminata GSMUA_Achr10G13530_001 I 0.761
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.761
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.761
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.761
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.761
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.761
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.761
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.761
OS01G0839100 Oryza sativa OS01G0839100 I 0.761
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.761
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.761
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.761
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.761
ZAT3 Arabidopsis thaliana AT4G35280 I 0.758
Bra017706 Brassica rapa Bra017706 I 0.758
BRADI2G23160 Brachypodium distachyon BRADI2G23160 I 0.758
F775_14723 Aegilops tauschii F775_14723 I 0.758
GSMUA_Achr6G34890_001 Musa acuminata GSMUA_Achr6G34890_001 I 0.758
scaffold_700593.1 Arabidopsis lyrata scaffold_700593.1 I 0.758
Traes_4DS_276818E4F Triticum aestivum Traes_4DS_276818E4F I 0.758
Bostr.7867s1389 Boechera stricta Bostr.7867s1389 I 0.758
Cagra.2350s0072 Capsella grandiflora Cagra.2350s0072 I 0.758
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.757
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.757