Gfo_R012286 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R012286 T135841_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS3
M02880_2.00 		Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG		 SELEX
Jolma et al.(2013)
GLIS3_1 		0.809 0.929
GLIS3
M10169_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_01 		0.809 0.929
GLIS3
M10170_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6_01 		0.809 0.929
GLIS3
M10171_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6 		0.809 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R012286 C2H2 ZF 365 388
Gfo_R012286 C2H2 ZF 397 424
Gfo_R012286 C2H2 ZF 431 454
Gfo_R012286 C2H2 ZF 460 484
Gfo_R012286 C2H2 ZF 490 514

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLIS3 Anolis carolinensis ENSACAG00000003374 I 0.809
GLIS3 Callithrix jacchus ENSCJAG00000011083 I 0.809
GLIS3 Cavia porcellus ENSCPOG00000005523 I 0.809
GLIS3 Equus caballus ENSECAG00000020544 I 0.809
GLIS3 Echinops telfairi ENSETEG00000015977 I 0.809
GLIS3 Homo sapiens ENSG00000107249 D 0.809
ENSLOCG00000012972 Lepisosteus oculatus ENSLOCG00000012972 I 0.809
ENSMEUG00000005102 Macropus eugenii ENSMEUG00000005102 I 0.809
GLIS3 Monodelphis domestica ENSMODG00000015403 I 0.809
ENSMPUG00000005095 Mustela putorius furo ENSMPUG00000005095 I 0.809
Glis3 Mus musculus ENSMUSG00000052942 I 0.809
ENSNLEG00000008824 Nomascus leucogenys ENSNLEG00000008824 I 0.809
ENSOANG00000014997 Ornithorhynchus anatinus ENSOANG00000014997 I 0.809
GLIS3 Otolemur garnettii ENSOGAG00000007376 I 0.809
ENSPANG00000025157 Papio anubis ENSPANG00000025157 I 0.809
ENSPPYG00000019250 Pongo abelii ENSPPYG00000019250 I 0.809
ENSPSIG00000005966 Pelodiscus sinensis ENSPSIG00000005966 I 0.809
GLIS3 Pteropus vampyrus ENSPVAG00000001839 I 0.809
Glis3 Rattus norvegicus ENSRNOG00000014768 I 0.809
ENSSTOG00000000302 Ictidomys tridecemlineatus ENSSTOG00000000302 I 0.809
ENSTSYG00000000686 Tarsius syrichta ENSTSYG00000000686 I 0.809
ENSP00000371398 Macaca fascicularis ENSP00000371398 I 0.809
Myotis_brandtii_GLIS3_10023567 Myotis brandtii Myotis_brandtii_GLIS3_10023567 I 0.809
ENSOARG00000013378 Ovis aries ENSOARG00000013378 I 0.807
GLIS3 Vicugna pacos ENSVPAG00000005473 I 0.807
ENSP00000384734-D2 Bos grunniens ENSP00000384734-D2 I 0.807
ENSFALG00000010519 Ficedula albicollis ENSFALG00000010519 I 0.802
GLIS3 Taeniopygia guttata ENSTGUG00000005266 I 0.802
ENSAPLG00000014844 Anas platyrhynchos ENSAPLG00000014844 I 0.799
GLIS3 Canis familiaris ENSCAFG00000031499 I 0.799
GLIS3 Gallus gallus ENSGALG00000010180 I 0.799
GLIS3 Procavia capensis ENSPCAG00000004139 I 0.799
Aan_R004381 Calypte anna Aan_R004381 I 0.799
Afo_R016063 Aptenodytes forsteri Afo_R016063 I 0.799
Ogr17806 Ophisaurus gracilis Ogr17806 I 0.799
Pvit_10484 Pogona vitticeps Pvit_10484 I 0.799
glis3 Xenopus tropicalis XB-GENE-984727 I 0.799
GLIS1 Cavia porcellus ENSCPOG00000009497 I 0.797
ENSLOCG00000003071 Lepisosteus oculatus ENSLOCG00000003071 I 0.797
ENSMEUG00000009882 Macropus eugenii ENSMEUG00000009882 I 0.797
SPU_018744 Strongylocentrotus purpuratus SPU_018744 I 0.794
Sakowv30037345m.g Saccoglossus kowalevskii Sakowv30037345m.g I 0.794
ENSAMXG00000005278 Astyanax mexicanus ENSAMXG00000005278 I 0.793
glis1b Danio rerio ENSDARG00000027933 I 0.793
GLIS1 Gasterosteus aculeatus ENSGACG00000012109 I 0.793
ENSGMOG00000018511 Gadus morhua ENSGMOG00000018511 I 0.793
ENSORLG00000003872 Oryzias latipes ENSORLG00000003872 I 0.793
ENSPFOG00000017914 Poecilia formosa ENSPFOG00000017914 I 0.793
GLIS1 Tetraodon nigroviridis ENSTNIG00000010694 I 0.793
ENSTRUG00000001198 Takifugu rubripes ENSTRUG00000001198 I 0.793
ENSXMAG00000013077 Xiphophorus maculatus ENSXMAG00000013077 I 0.793
e_gw.471.22.1 Branchiostoma floridae e_gw.471.22.1 I 0.790
gw.28.157.1 Branchiostoma floridae gw.28.157.1 I 0.790
ENSORLG00000007755 Oryzias latipes ENSORLG00000007755 I 0.789
ENSPFOG00000019805 Poecilia formosa ENSPFOG00000019805 I 0.789
ENSONIG00000014033 Oreochromis niloticus ENSONIG00000014033 I 0.786
ENSXMAG00000005013 Xiphophorus maculatus ENSXMAG00000005013 I 0.779
ENSPFOG00000002618 Poecilia formosa ENSPFOG00000002618 I 0.778
ENSXMAG00000005337 Xiphophorus maculatus ENSXMAG00000005337 I 0.778
glis1a Danio rerio ENSDARG00000068580 I 0.772
GLIS3 Erinaceus europaeus ENSEEUG00000004107 I 0.757
SMAR005079 Strigamia maritima SMAR005079 I 0.756