glis3 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-984727 T145710_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS3
M02880_2.00 		Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG		 SELEX
Jolma et al.(2013)
GLIS3_1 		0.817 0.947
GLIS3
M10169_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_01 		0.817 0.947
GLIS3
M10170_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6_01 		0.817 0.947
GLIS3
M10171_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6 		0.817 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002934220 C2H2 ZF 491 516
XP_002934220 C2H2 ZF 525 552
XP_002934220 C2H2 ZF 559 582
XP_002934220 C2H2 ZF 588 612
XP_002934220 C2H2 ZF 618 642

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLIS3 Anolis carolinensis ENSACAG00000003374 I 0.817
GLIS3 Callithrix jacchus ENSCJAG00000011083 I 0.817
GLIS3 Cavia porcellus ENSCPOG00000005523 I 0.817
GLIS3 Equus caballus ENSECAG00000020544 I 0.817
GLIS3 Homo sapiens ENSG00000107249 D 0.817
ENSMEUG00000005102 Macropus eugenii ENSMEUG00000005102 I 0.817
GLIS3 Monodelphis domestica ENSMODG00000015403 I 0.817
ENSMPUG00000005095 Mustela putorius furo ENSMPUG00000005095 I 0.817
Glis3 Mus musculus ENSMUSG00000052942 I 0.817
ENSNLEG00000008824 Nomascus leucogenys ENSNLEG00000008824 I 0.817
ENSOANG00000014997 Ornithorhynchus anatinus ENSOANG00000014997 I 0.817
GLIS3 Otolemur garnettii ENSOGAG00000007376 I 0.817
ENSPANG00000025157 Papio anubis ENSPANG00000025157 I 0.817
ENSPSIG00000005966 Pelodiscus sinensis ENSPSIG00000005966 I 0.817
GLIS3 Pteropus vampyrus ENSPVAG00000001839 I 0.817
Glis3 Rattus norvegicus ENSRNOG00000014768 I 0.817
ENSSTOG00000000302 Ictidomys tridecemlineatus ENSSTOG00000000302 I 0.817
ENSTSYG00000000686 Tarsius syrichta ENSTSYG00000000686 I 0.817
ENSP00000371398 Macaca fascicularis ENSP00000371398 I 0.817
Myotis_brandtii_GLIS3_10023567 Myotis brandtii Myotis_brandtii_GLIS3_10023567 I 0.817
GLIS3 Echinops telfairi ENSETEG00000015977 I 0.815
ENSOARG00000013378 Ovis aries ENSOARG00000013378 I 0.815
GLIS3 Vicugna pacos ENSVPAG00000005473 I 0.815
ENSP00000384734-D2 Bos grunniens ENSP00000384734-D2 I 0.815
ENSLOCG00000012972 Lepisosteus oculatus ENSLOCG00000012972 I 0.814
ENSAPLG00000014844 Anas platyrhynchos ENSAPLG00000014844 I 0.808
GLIS3 Canis familiaris ENSCAFG00000031499 I 0.808
GLIS3 Gallus gallus ENSGALG00000010180 I 0.808
GLIS3 Procavia capensis ENSPCAG00000004139 I 0.808
ENSPPYG00000019250 Pongo abelii ENSPPYG00000019250 I 0.808
Afo_R016063 Aptenodytes forsteri Afo_R016063 I 0.808
Ogr17806 Ophisaurus gracilis Ogr17806 I 0.808
GLIS1 Cavia porcellus ENSCPOG00000009497 I 0.806
ENSLOCG00000003071 Lepisosteus oculatus ENSLOCG00000003071 I 0.806
ENSMEUG00000009882 Macropus eugenii ENSMEUG00000009882 I 0.806
Aan_R004381 Calypte anna Aan_R004381 I 0.806
Pvit_10484 Pogona vitticeps Pvit_10484 I 0.806
ENSPFOG00000002618 Poecilia formosa ENSPFOG00000002618 I 0.803
GLIS3 Taeniopygia guttata ENSTGUG00000005266 I 0.803
ENSXMAG00000005337 Xiphophorus maculatus ENSXMAG00000005337 I 0.803
ENSAMXG00000005278 Astyanax mexicanus ENSAMXG00000005278 I 0.802
glis1b Danio rerio ENSDARG00000027933 I 0.802
GLIS1 Gasterosteus aculeatus ENSGACG00000012109 I 0.802
ENSGMOG00000018511 Gadus morhua ENSGMOG00000018511 I 0.802
ENSORLG00000003872 Oryzias latipes ENSORLG00000003872 I 0.802
ENSPFOG00000017914 Poecilia formosa ENSPFOG00000017914 I 0.802
GLIS1 Tetraodon nigroviridis ENSTNIG00000010694 I 0.802
ENSTRUG00000001198 Takifugu rubripes ENSTRUG00000001198 I 0.802
ENSXMAG00000013077 Xiphophorus maculatus ENSXMAG00000013077 I 0.802
SPU_018744 Strongylocentrotus purpuratus SPU_018744 I 0.802
ENSFALG00000010519 Ficedula albicollis ENSFALG00000010519 I 0.801
Sakowv30037345m.g Saccoglossus kowalevskii Sakowv30037345m.g I 0.800
Gfo_R012286 Geospiza fortis Gfo_R012286 I 0.799
e_gw.471.22.1 Branchiostoma floridae e_gw.471.22.1 I 0.798
gw.28.157.1 Branchiostoma floridae gw.28.157.1 I 0.798
ENSORLG00000007755 Oryzias latipes ENSORLG00000007755 I 0.797
ENSPFOG00000019805 Poecilia formosa ENSPFOG00000019805 I 0.797
ENSONIG00000014033 Oreochromis niloticus ENSONIG00000014033 I 0.795
ENSXMAG00000005013 Xiphophorus maculatus ENSXMAG00000005013 I 0.788
glis1a Danio rerio ENSDARG00000068580 I 0.778
SMAR005079 Strigamia maritima SMAR005079 I 0.763
GLIS1 Pan troglodytes ENSPTRG00000000756 I 0.762
ENSAMXG00000019181 Astyanax mexicanus ENSAMXG00000019181 I 0.761
GLIS3 Erinaceus europaeus ENSEEUG00000004107 I 0.761
DAPPUDRAFT_347217 Daphnia pulex DAPPUDRAFT_347217 I 0.759
ENSAPLG00000013972 Anas platyrhynchos ENSAPLG00000013972 I 0.759
ENSGALG00000010721 Gallus gallus ENSGALG00000010721 I 0.759
ENSLACG00000012147 Latimeria chalumnae ENSLACG00000012147 I 0.759
GLIS1 Meleagris gallopavo ENSMGAG00000011303 I 0.759
ENSPSIG00000002846 Pelodiscus sinensis ENSPSIG00000002846 I 0.759
Aan_R004053 Calypte anna Aan_R004053 I 0.759
Afo_R001041 Aptenodytes forsteri Afo_R001041 I 0.759
Pvit_11533 Pogona vitticeps Pvit_11533 I 0.759
ENSFALG00000011974 Ficedula albicollis ENSFALG00000011974 I 0.757
GLIS1 Taeniopygia guttata ENSTGUG00000009294 I 0.757
Brh_R013214 Buceros rhinoceros Brh_R013214 I 0.757
Gfo_R010168 Geospiza fortis Gfo_R010168 I 0.757
Tal_R012308 Tyto alba Tal_R012308 I 0.757