GLIS1 (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000010694 T112059_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS3
M02880_2.00 		Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG		 SELEX
Jolma et al.(2013)
GLIS3_1 		0.812 0.938
GLIS3
M10169_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_01 		0.812 0.938
GLIS3
M10170_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6_01 		0.812 0.938
GLIS3
M10171_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6 		0.812 0.938
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000013610 C2H2 ZF 131 155
ENSTNIP00000013610 C2H2 ZF 164 191
ENSTNIP00000013610 C2H2 ZF 198 221
ENSTNIP00000013610 C2H2 ZF 227 251
ENSTNIP00000013610 C2H2 ZF 257 281

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000005278 Astyanax mexicanus ENSAMXG00000005278 I 0.818
glis1b Danio rerio ENSDARG00000027933 I 0.818
GLIS1 Gasterosteus aculeatus ENSGACG00000012109 I 0.818
ENSGMOG00000018511 Gadus morhua ENSGMOG00000018511 I 0.818
ENSORLG00000003872 Oryzias latipes ENSORLG00000003872 I 0.818
ENSPFOG00000017914 Poecilia formosa ENSPFOG00000017914 I 0.818
ENSTRUG00000001198 Takifugu rubripes ENSTRUG00000001198 I 0.818
ENSXMAG00000013077 Xiphophorus maculatus ENSXMAG00000013077 I 0.818
GLIS1 Cavia porcellus ENSCPOG00000009497 I 0.814
ENSLOCG00000003071 Lepisosteus oculatus ENSLOCG00000003071 I 0.814
ENSMEUG00000009882 Macropus eugenii ENSMEUG00000009882 I 0.814
ENSAPLG00000014844 Anas platyrhynchos ENSAPLG00000014844 I 0.812
GLIS3 Canis familiaris ENSCAFG00000031499 I 0.812
GLIS3 Callithrix jacchus ENSCJAG00000011083 I 0.812
GLIS3 Cavia porcellus ENSCPOG00000005523 I 0.812
GLIS3 Equus caballus ENSECAG00000020544 I 0.812
GLIS3 Homo sapiens ENSG00000107249 D 0.812
ENSMEUG00000005102 Macropus eugenii ENSMEUG00000005102 I 0.812
GLIS3 Monodelphis domestica ENSMODG00000015403 I 0.812
ENSMPUG00000005095 Mustela putorius furo ENSMPUG00000005095 I 0.812
Glis3 Mus musculus ENSMUSG00000052942 I 0.812
ENSNLEG00000008824 Nomascus leucogenys ENSNLEG00000008824 I 0.812
ENSOANG00000014997 Ornithorhynchus anatinus ENSOANG00000014997 I 0.812
ENSOARG00000013378 Ovis aries ENSOARG00000013378 I 0.812
GLIS3 Otolemur garnettii ENSOGAG00000007376 I 0.812
ENSPANG00000025157 Papio anubis ENSPANG00000025157 I 0.812
ENSPSIG00000005966 Pelodiscus sinensis ENSPSIG00000005966 I 0.812
GLIS3 Pteropus vampyrus ENSPVAG00000001839 I 0.812
Glis3 Rattus norvegicus ENSRNOG00000014768 I 0.812
ENSSTOG00000000302 Ictidomys tridecemlineatus ENSSTOG00000000302 I 0.812
ENSTSYG00000000686 Tarsius syrichta ENSTSYG00000000686 I 0.812
GLIS3 Vicugna pacos ENSVPAG00000005473 I 0.812
Afo_R016063 Aptenodytes forsteri Afo_R016063 I 0.812
ENSP00000371398 Macaca fascicularis ENSP00000371398 I 0.812
ENSP00000384734-D2 Bos grunniens ENSP00000384734-D2 I 0.812
Myotis_brandtii_GLIS3_10023567 Myotis brandtii Myotis_brandtii_GLIS3_10023567 I 0.812
Ogr17806 Ophisaurus gracilis Ogr17806 I 0.812
GLIS3 Anolis carolinensis ENSACAG00000003374 I 0.811
GLIS3 Gallus gallus ENSGALG00000010180 I 0.811
GLIS3 Echinops telfairi ENSETEG00000015977 I 0.810
Aan_R004381 Calypte anna Aan_R004381 I 0.810
Pvit_10484 Pogona vitticeps Pvit_10484 I 0.810
ENSLOCG00000012972 Lepisosteus oculatus ENSLOCG00000012972 I 0.809
GLIS3 Taeniopygia guttata ENSTGUG00000005266 I 0.807
SPU_018744 Strongylocentrotus purpuratus SPU_018744 I 0.806
e_gw.471.22.1 Branchiostoma floridae e_gw.471.22.1 I 0.805
gw.28.157.1 Branchiostoma floridae gw.28.157.1 I 0.805
Sakowv30037345m.g Saccoglossus kowalevskii Sakowv30037345m.g I 0.804
GLIS3 Procavia capensis ENSPCAG00000004139 I 0.802
ENSPPYG00000019250 Pongo abelii ENSPPYG00000019250 I 0.802
glis3 Xenopus tropicalis XB-GENE-984727 I 0.802
ENSPFOG00000019805 Poecilia formosa ENSPFOG00000019805 I 0.798
ENSORLG00000007755 Oryzias latipes ENSORLG00000007755 I 0.797
ENSFALG00000010519 Ficedula albicollis ENSFALG00000010519 I 0.795
ENSONIG00000014033 Oreochromis niloticus ENSONIG00000014033 I 0.795
Gfo_R012286 Geospiza fortis Gfo_R012286 I 0.793
ENSPFOG00000002618 Poecilia formosa ENSPFOG00000002618 I 0.792
ENSXMAG00000005337 Xiphophorus maculatus ENSXMAG00000005337 I 0.792
glis1a Danio rerio ENSDARG00000068580 I 0.790
ENSXMAG00000005013 Xiphophorus maculatus ENSXMAG00000005013 I 0.788
GLIS1 Pan troglodytes ENSPTRG00000000756 I 0.784
Pvit_11533 Pogona vitticeps Pvit_11533 I 0.777
SMAR005079 Strigamia maritima SMAR005079 I 0.775
ENSAPLG00000013972 Anas platyrhynchos ENSAPLG00000013972 I 0.768
ENSGALG00000010721 Gallus gallus ENSGALG00000010721 I 0.768
ENSLACG00000012147 Latimeria chalumnae ENSLACG00000012147 I 0.768
GLIS1 Meleagris gallopavo ENSMGAG00000011303 I 0.768
ENSPSIG00000002846 Pelodiscus sinensis ENSPSIG00000002846 I 0.768
Aan_R004053 Calypte anna Aan_R004053 I 0.768
Afo_R001041 Aptenodytes forsteri Afo_R001041 I 0.768
DAPPUDRAFT_347217 Daphnia pulex DAPPUDRAFT_347217 I 0.767
ENSFALG00000011974 Ficedula albicollis ENSFALG00000011974 I 0.766
GLIS1 Taeniopygia guttata ENSTGUG00000009294 I 0.766
Brh_R013214 Buceros rhinoceros Brh_R013214 I 0.766
Gfo_R010168 Geospiza fortis Gfo_R010168 I 0.766
Tal_R012308 Tyto alba Tal_R012308 I 0.766
ENSAMXG00000019181 Astyanax mexicanus ENSAMXG00000019181 I 0.760