GPLIN_001226400 (Globodera pallida)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 GPLIN_001226400 T160872_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.768 0.768
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.768 0.768
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.768 0.768
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.768 0.768
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.768 0.768
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_001226400 CBF/NF-Y 187 242

Links

Other CBF/NF-Y family TFs
Other Globodera pallida TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-nMf.1.1.scaf00089-snap-gene-0.29 Meloidogyne floridensis maker-nMf.1.1.scaf00089-snap-gene-0.29 I 0.911
MhA1_Contig2248.frz3.gene3 Meloidogyne hapla MhA1_Contig2248.frz3.gene3 I 0.911
ENSEEUG00000006487 Erinaceus europaeus ENSEEUG00000006487 I 0.837
DAPPUDRAFT_300656 Daphnia pulex DAPPUDRAFT_300656 I 0.804
GPUH_0002134401 Gongylonema pulchrum GPUH_0002134401 I 0.804
nAv.1.0.1.g00776 Acanthocheilonema viteae nAv.1.0.1.g00776 I 0.804
nLs.2.1.2.g05605 Litomosoides sigmodontis nLs.2.1.2.g05605 I 0.804
SBAD_0000676601 Soboliphyme baturini SBAD_0000676601 I 0.804
ENSMEUG00000005917 Macropus eugenii ENSMEUG00000005917 I 0.794
WUBG_05875 Wuchereria bancrofti WUBG_05875 I 0.786
Bm6776 Brugia malayi Bm6776 I 0.786
ISCW017122 Ixodes scapularis ISCW017122 I 0.786
LOAG_02863 Loa loa LOAG_02863 I 0.786
SPU_025589 Strongylocentrotus purpuratus SPU_025589 I 0.786
SPU_025737 Strongylocentrotus purpuratus SPU_025737 I 0.786
WBGene00242147 Onchocerca volvulus WBGene00242147 I 0.786
estExt_fgenesh2_pg.C_2670023 Branchiostoma floridae estExt_fgenesh2_pg.C_2670023 I 0.786
fgenesh2_pg.scaffold_208000070 Branchiostoma floridae fgenesh2_pg.scaffold_208000070 I 0.786
Sakowv30044373m.g Saccoglossus kowalevskii Sakowv30044373m.g I 0.786
nDi.2.2.2.g05199 Dirofilaria immitis nDi.2.2.2.g05199 I 0.786
nOo.2.0.1.g03339 Onchocerca ochengi nOo.2.0.1.g03339 I 0.786
SSLN_0000312901 Schistocephalus solidus SSLN_0000312901 I 0.786
PXEA_0001432401 Protopolystoma xenopodis PXEA_0001432401 I 0.780
ACEP21720 Atta cephalotes ACEP21720 I 0.768
AGAP007376 Anopheles gambiae AGAP007376 I 0.768
NFYA Anolis carolinensis ENSACAG00000016527 I 0.768
ENSAMEG00000004435 Ailuropoda melanoleuca ENSAMEG00000004435 I 0.768
ENSAMXG00000002532 Astyanax mexicanus ENSAMXG00000002532 I 0.768
ENSAPLG00000002694 Anas platyrhynchos ENSAPLG00000002694 I 0.768
NFYA Bos taurus ENSBTAG00000009905 I 0.768
NFYA Canis familiaris ENSCAFG00000001580 I 0.768
NFYA Callithrix jacchus ENSCJAG00000004074 I 0.768
NFYA Cavia porcellus ENSCPOG00000011146 I 0.768
ENSCSAG00000011196 Chlorocebus sabaeus ENSCSAG00000011196 I 0.768
nfya Danio rerio ENSDARG00000042004 I 0.768
NFYA Dasypus novemcinctus ENSDNOG00000039692 I 0.768
Nfya Dipodomys ordii ENSDORG00000006450 I 0.768
NFYA Equus caballus ENSECAG00000007952 I 0.768
ENSETEG00000000629 Echinops telfairi ENSETEG00000000629 I 0.768
ENSFALG00000002949 Ficedula albicollis ENSFALG00000002949 I 0.768
NFYA Felis catus ENSFCAG00000027813 I 0.768
NFYA Homo sapiens ENSG00000001167 D 0.768
nfyal Gasterosteus aculeatus ENSGACG00000007867 I 0.768
NFYA Gallus gallus ENSGALG00000003247 I 0.768
NFYA Gorilla gorilla ENSGGOG00000008485 I 0.768
ENSGMOG00000001226 Gadus morhua ENSGMOG00000001226 I 0.768
ENSLACG00000015334 Latimeria chalumnae ENSLACG00000015334 I 0.768
NFYA Loxodonta africana ENSLAFG00000016570 I 0.768
ENSLOCG00000012292 Lepisosteus oculatus ENSLOCG00000012292 I 0.768
NFYA Meleagris gallopavo ENSMGAG00000010140 I 0.768
NFYA Myotis lucifugus ENSMLUG00000008253 I 0.768
NFYA Macaca mulatta ENSMMUG00000021173 I 0.768
NFYA Monodelphis domestica ENSMODG00000013084 I 0.768
ENSMPUG00000013686 Mustela putorius furo ENSMPUG00000013686 I 0.768
Nfya Mus musculus ENSMUSG00000023994 D 0.768
ENSNLEG00000005028 Nomascus leucogenys ENSNLEG00000005028 I 0.768
NFYA Ornithorhynchus anatinus ENSOANG00000011990 I 0.768
ENSOARG00000000894 Ovis aries ENSOARG00000000894 I 0.768
NFYA Oryctolagus cuniculus ENSOCUG00000016869 I 0.768
NFYA Otolemur garnettii ENSOGAG00000002636 I 0.768
nfyal Oryzias latipes ENSORLG00000006088 I 0.768
ENSPANG00000009714 Papio anubis ENSPANG00000009714 I 0.768
NFYA Procavia capensis ENSPCAG00000011508 I 0.768
ENSPFOG00000012890 Poecilia formosa ENSPFOG00000012890 I 0.768
ENSPMAG00000000964 Petromyzon marinus ENSPMAG00000000964 I 0.768
ENSPPYG00000016588 Pongo abelii ENSPPYG00000016588 I 0.768
ENSPSIG00000013239 Pelodiscus sinensis ENSPSIG00000013239 I 0.768
NFYA Pan troglodytes ENSPTRG00000018146 I 0.768
NFYA Pteropus vampyrus ENSPVAG00000008318 I 0.768
Nfya Rattus norvegicus ENSRNOG00000012702 I 0.768
ENSSHAG00000017808 Sarcophilus harrisii ENSSHAG00000017808 I 0.768
ENSSSCG00000001600 Sus scrofa ENSSSCG00000001600 I 0.768
NFYA Sus scrofa ENSSSCG00000001611 I 0.768
ENSSSCG00000022941 Sus scrofa ENSSSCG00000022941 I 0.768
ENSSTOG00000023405 Ictidomys tridecemlineatus ENSSTOG00000023405 I 0.768
NFYA Taeniopygia guttata ENSTGUG00000001832 I 0.768
nfyal Tetraodon nigroviridis ENSTNIG00000015135 I 0.768
nfyal Takifugu rubripes ENSTRUG00000003925 I 0.768
ENSTSYG00000007176 Tarsius syrichta ENSTSYG00000007176 I 0.768
NFYA Tursiops truncatus ENSTTRG00000013394 I 0.768
NFYA Vicugna pacos ENSVPAG00000008028 I 0.768
ENSXMAG00000010069 Xiphophorus maculatus ENSXMAG00000010069 I 0.768
GB50732 Apis mellifera GB50732 I 0.768
NV16776 Nasonia vitripennis NV16776 I 0.768
PHUM011400 Pediculus humanus PHUM011400 I 0.768
RPRC000951 Rhodnius prolixus RPRC000951 I 0.768
SINV17788 Solenopsis invicta SINV17788 I 0.768
Smp_030250 Schistosoma mansoni Smp_030250 I 0.768
TC007453 Tribolium castaneum TC007453 I 0.768
YQE_10237 Dendroctonus ponderosae YQE_10237 I 0.768
Aan_R003793 Calypte anna Aan_R003793 I 0.768
Afo_R002068 Aptenodytes forsteri Afo_R002068 I 0.768
Alligator_sinensis_CCG020430.1 Alligator sinensis Alligator_sinensis_CCG020430.1 I 0.768
Brh_R001483 Buceros rhinoceros Brh_R001483 I 0.768
Cflo_01621--XP_001121566.1_APIME Camponotus floridanus Cflo_01621--XP_001121566.1_APIME I 0.768
Cmyd_10011198 Chelonia mydas Cmyd_10011198 I 0.768
ENSP00000345702-D2 Bos grunniens ENSP00000345702-D2 I 0.768
ENSP00000345702 Macaca fascicularis ENSP00000345702 I 0.768
Hsal_09569--XP_001121566.1_APIME Harpegnathos saltator Hsal_09569--XP_001121566.1_APIME I 0.768
Myotis_brandtii_NFYA_10015424 Myotis brandtii Myotis_brandtii_NFYA_10015424 I 0.768
Pvit_06013 Pogona vitticeps Pvit_06013 I 0.768
Tal_R012767 Tyto alba Tal_R012767 I 0.768
AAI00179 Xenopus laevis AAI00179 I 0.768
HHAL009455-PA Halyomorpha halys HHAL009455-PA I 0.768
LDEC000161 Leptinotarsa decemlineata LDEC000161 I 0.768
Sjc_0096630 Schistosoma japonicum Sjc_0096630 I 0.768
nfya Xenopus tropicalis XB-GENE-942007 I 0.768
nfya.S Xenopus laevis XB-GENE-942013 I 0.768
A_04341 Schistosoma haematobium A_04341 I 0.768
ALUE_0000650501 Ascaris lumbricoides ALUE_0000650501 I 0.768
ASIM_0001003201 Anisakis simplex ASIM_0001003201 I 0.768
ASU_03710 Ascaris suum ASU_03710 I 0.768
DME_0000143101 Dracunculus medinensis DME_0000143101 I 0.768
SCUD_0001212601 Schistosoma curassoni SCUD_0001212601 I 0.768
SMRZ_0000504601 Schistosoma margrebowiei SMRZ_0000504601 I 0.768
SMTD_0000774701 Schistosoma mattheei SMTD_0000774701 I 0.768
SROB_0000925201 Schistosoma rodhaini SROB_0000925201 I 0.768
TCNE_0001890401 Toxocara canis TCNE_0001890401 I 0.768
TRE_0001025401 Trichobilharzia regenti TRE_0001025401 I 0.768
CpipJ_CPIJ010764 Culex pipiens CpipJ_CPIJ010764 I 0.750
CpipJ_CPIJ017497 Culex pipiens CpipJ_CPIJ017497 I 0.750
Aqu1.224085 Amphimedon queenslandica Aqu1.224085 I 0.750
CGI_10002627 Crassostrea gigas CGI_10002627 I 0.750
CGI_10012001 Crassostrea gigas CGI_10012001 I 0.750
CPIJ010764 Culex quinquefasciatus CPIJ010764 I 0.750
CPIJ017497 Culex quinquefasciatus CPIJ017497 I 0.750
NFYA Microcebus murinus ENSMICG00000009686 I 0.750
NFYA Sorex araneus ENSSARG00000009765 I 0.750
Nf-YA Drosophila melanogaster FBgn0035993 I 0.750
GA17755 Drosophila pseudoobscura FBgn0077764 I 0.750
GF24667 Drosophila ananassae FBgn0101660 I 0.750
GG14038 Drosophila erecta FBgn0106300 I 0.750
GH15528 Drosophila grimshawi FBgn0123000 I 0.750
GI16805 Drosophila mojavensis FBgn0139552 I 0.750
GJ12551 Drosophila virilis FBgn0199791 I 0.750
GE21241 Drosophila yakuba FBgn0238513 I 0.750
Ocbimv22031841m.g Octopus bimaculoides Ocbimv22031841m.g I 0.750
Sakowv30001860m.g Saccoglossus kowalevskii Sakowv30001860m.g I 0.750
SMU15024997 Schmidtea mediterranea SMU15024997 I 0.750
SMU15029949 Schmidtea mediterranea SMU15029949 I 0.750
AALB004535 Anopheles albimanus AALB004535 I 0.750
ACUA028400 Anopheles culicifacies ACUA028400 I 0.750
csin107256 Clonorchis sinensis csin107256 I 0.750
D915_02266 Fasciola hepatica D915_02266 I 0.750
ECPE_0000487901 Echinostoma caproni ECPE_0000487901 I 0.750
MCOS_0000435001 Mesocestoides corti MCOS_0000435001 I 0.750
nRc.2.0.1.g32781 Romanomermis culicivorax nRc.2.0.1.g32781 I 0.750
T265_04195 Opisthorchis viverrini T265_04195 I 0.750
TCLT_0000871701 Thelazia callipaeda TCLT_0000871701 I 0.750
TsM_000826500 Taenia solium TsM_000826500 I 0.750
TTAC_0000640001 Hydatigera taeniaeformis TTAC_0000640001 I 0.750
ACYPI008647 Acyrthosiphon pisum ACYPI008647 I 0.732
ACYPI48827 Acyrthosiphon pisum ACYPI48827 I 0.732
CapteG223273 Capitella teleta CapteG223273 I 0.732
ENSCING00000013482 Ciona intestinalis ENSCING00000013482 I 0.732
ENSCSAVG00000007408 Ciona savignyi ENSCSAVG00000007408 I 0.732
nfyal Danio rerio ENSDARG00000001621 I 0.732
MESCA012339 Megaselia scalaris MESCA012339 I 0.732
tetur23g00370 Tetranychus urticae tetur23g00370 I 0.732
Ocbimv22027261m.g Octopus bimaculoides Ocbimv22027261m.g I 0.732
MDOA015095 Musca domestica MDOA015095 I 0.732
PPAI000251 Phlebotomus papatasi PPAI000251 I 0.732
ANCCAN_07957 Ancylostoma caninum ANCCAN_07957 I 0.732
ANCCEY_15520 Ancylostoma ceylanicum ANCCEY_15520 I 0.732
ANCDUO_00071 Ancylostoma duodenale ANCDUO_00071 I 0.732
DICVIV_12815 Dictyocaulus viviparus DICVIV_12815 I 0.732
HCOI00898900 Haemonchus contortus HCOI00898900 I 0.732
HDID_0001056801 Hymenolepis diminuta HDID_0001056801 I 0.732
HmN_000419600 Hymenolepis microstoma HmN_000419600 I 0.732
HNAJ_0000223001 Hymenolepis nana HNAJ_0000223001 I 0.732
HPBE_0000764601 Heligmosomoides bakeri HPBE_0000764601 I 0.732
HPLM_0000552201 Haemonchus placei HPLM_0000552201 I 0.732
L596_g5816 Steinernema carpocapsae L596_g5816 I 0.732
L893_g18096 Steinernema glaseri L893_g18096 I 0.732
L898_g620 Steinernema monticolum L898_g620 I 0.732
NECAME_09605 Necator americanus NECAME_09605 I 0.732
OESDEN_02547 Oesophagostomum dentatum OESDEN_02547 I 0.732
OESDEN_11135 Oesophagostomum dentatum OESDEN_11135 I 0.732
TELCIR_00805 Teladorsagia circumcincta TELCIR_00805 I 0.732
HelroG146050 Helobdella robusta HelroG146050 I 0.714
NEMVEDRAFT_v1g248844 Nematostella vectensis NEMVEDRAFT_v1g248844 I 0.714
NEMVEDRAFT_v1g82757 Nematostella vectensis NEMVEDRAFT_v1g82757 I 0.714
ACOC_0000844001 Angiostrongylus costaricensis ACOC_0000844001 I 0.714
D918_06860 Trichuris suis D918_06860 I 0.714
L892_g3951 Steinernema scapterisci L892_g3951 I 0.714
NBR_0000887901 Nippostrongylus brasiliensis NBR_0000887901 I 0.714
TMUE_s0062005000 Trichuris muris TMUE_s0062005000 I 0.714
TTRE_0000464501 Trichuris trichiura TTRE_0000464501 I 0.714