Carubv10006250m.g (Capsella rubella)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 Carubv10006250m.g T165429_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10006250m CSD 9 75

Links

Other CSD family TFs
Other Capsella rubella TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.2236s0009 Capsella grandiflora Cagra.2236s0009 N 1.000
Bo7g117730 Brassica oleracea Bo7g117730 N 0.879
Bra017742 Brassica rapa Bra017742 N 0.879
Bostr.7867s1467 Boechera stricta Bostr.7867s1467 N 0.864
CSP1 Arabidopsis thaliana AT4G36020 N 0.818
Bo1g006000 Brassica oleracea Bo1g006000 N 0.818
CSDP1 Arabidopsis lyrata fgenesh2_kg.7__465__AT4G36020.1 N 0.803
Bra011655 Brassica rapa Bra011655 N 0.788
Bostr.18351s0255 Boechera stricta Bostr.18351s0255 N 0.773
Cagra.3126s0019 Capsella grandiflora Cagra.3126s0019 N 0.773
Carubv10015336m.g Capsella rubella Carubv10015336m.g N 0.773
Thhalv10022795m.g Eutrema salsugineum Thhalv10022795m.g N 0.773
Thhalv10026001m.g Eutrema salsugineum Thhalv10026001m.g N 0.773
Bo7g012920 Brassica oleracea Bo7g012920 N 0.758
Bra002099 Brassica rapa Bra002099 N 0.758
ATCSP3 Arabidopsis lyrata fgenesh2_kg.3__3388__AT2G17870.1 N 0.758