Bra017742 (Brassica rapa)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 Bra017742 T164305_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra017742.1-P CSD 11 77

Links

Other CSD family TFs
Other Brassica rapa TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo7g117730 Brassica oleracea Bo7g117730 N 1.000
Bostr.7867s1467 Boechera stricta Bostr.7867s1467 N 0.894
Bo1g006000 Brassica oleracea Bo1g006000 N 0.879
Bra011655 Brassica rapa Bra011655 N 0.879
Cagra.2236s0009 Capsella grandiflora Cagra.2236s0009 N 0.879
Carubv10006250m.g Capsella rubella Carubv10006250m.g N 0.879
CSDP1 Arabidopsis lyrata fgenesh2_kg.7__465__AT4G36020.1 N 0.848
CSP1 Arabidopsis thaliana AT4G36020 N 0.833
Thhalv10026001m.g Eutrema salsugineum Thhalv10026001m.g N 0.833
Bostr.18351s0255 Boechera stricta Bostr.18351s0255 N 0.788
ATCSP3 Arabidopsis lyrata fgenesh2_kg.3__3388__AT2G17870.1 N 0.758
Cagra.3126s0019 Capsella grandiflora Cagra.3126s0019 N 0.758
Carubv10015336m.g Capsella rubella Carubv10015336m.g N 0.758
Thhalv10022795m.g Eutrema salsugineum Thhalv10022795m.g N 0.758
evm.TU.supercontig_6.261 Carica papaya evm.TU.supercontig_6.261 N 0.742
CSP3 Arabidopsis thaliana AT2G17870 N 0.727
Bo7g012920 Brassica oleracea Bo7g012920 N 0.727
Bra002099 Brassica rapa Bra002099 N 0.727
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.727
MDP0000121628 Malus domestica MDP0000121628 N 0.727
Gorai.008G062500 Gossypium raimondii Gorai.008G062500 N 0.712
MDP0000198079 Malus domestica MDP0000198079 N 0.712
MDP0000632148 Malus domestica MDP0000632148 N 0.712