orange1.1g022924m.g (Citrus sinensis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 orange1.1g022924m.g T196711_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022924m GATA 201 238
orange1.1g023942m GATA 201 238
orange1.1g024832m GATA 173 210
orange1.1g025137m GATA 201 238
orange1.1g026465m GATA 201 237
orange1.1g026490m GATA 201 237
orange1.1g030237m GATA 92 129

Links

Other GATA family TFs
Other Citrus sinensis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_034530 Theobroma cacao TCM_034530 N 0.867
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.867
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.867
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.867
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.867
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.842
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.842
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.840
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.840
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.840
Ca_14968 Cicer arietinum Ca_14968 N 0.840
Pm004390 Prunus mume Pm004390 N 0.840
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.840
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.840
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.840
MDP0000303048 Malus domestica MDP0000303048 N 0.840
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.837
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.837
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.837
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.836
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.836
29596.m000720 Ricinus communis 29596.m000720 N 0.836
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.836
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.836
PK04210.1 Cannabis sativa PK04210.1 N 0.836
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.836
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.834
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.831
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.831
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.831
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.831
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.826
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.825
Cla022486 Citrullus lanatus Cla022486 N 0.809
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.809
GSMUA_Achr10G07970_001 Musa acuminata GSMUA_Achr10G07970_001 N 0.805
PDK_20s1363101g001 Phoenix dactylifera PDK_20s1363101g001 N 0.805