CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OBART06G01600
(
Oryza barthii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OBART06G01600
T200657_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART06G01600.1
GRAS
217
466
LVRALTACADSLSAGNHEAANYYLARLGEMASPAGPTPMHRVAAYFTEALALRVVRMWPHMFDIGPPRELTGDAFGGGDDDAMALRILNAITPIPRFLHFTLNERLLREFEGHERVHVIDFDIKQGLQWPGLLQSLAARAVPPAHVRITGVGESRQELQETGARLARVAAALGLAFEFHPVVDRLEDVRLWMLHVKRGECVAVNCVLAMHRLLRDDAALTDFLGLARSTGATILLLGEHEGGGLNSGSGR
Links
Other
GRAS
family TFs
Other
Oryza barthii
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA06G0016600
Oryza glaberrima
ORGLA06G0016600
N
0.984
BGIOSGA022020
Oryza indica
BGIOSGA022020
N
0.975
OGLUM06G01600
Oryza glumaepatula
OGLUM06G01600
N
0.975
ORUFI06G01590
Oryza rufipogon
ORUFI06G01590
N
0.975
DLT
Oryza sativa
OS06G0127800
N
0.975
Si008220m.g
Setaria italica
Si008220m.g
N
0.864
Sb10g001690
Sorghum bicolor
Sb10g001690
N
0.852
AC234164.1_FG004
Zea mays
AC234164.1_FG004
N
0.840
Pavir.J06885
Panicum virgatum
Pavir.J06885
N
0.827
BRADI1G49630
Brachypodium distachyon
BRADI1G49630
N
0.761
BGIOSGA013002
Oryza indica
BGIOSGA013002
N
0.753
Pavir.Da02353
Panicum virgatum
Pavir.Da02353
N
0.733
Traes_4BS_EC11C40EC
Triticum aestivum
Traes_4BS_EC11C40EC
N
0.711
MLOC_31327
Hordeum vulgare
MLOC_31327
N
0.708