CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si008220m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si008220m.g
T201490_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si008220m
GRAS
215
585
LVVALTACADSLAARNHNAASYYLARLGEMASPAGPTPMHRVAAYFAEALALRVVRTWPHLFDVTPPRELTDGAAGDDDATALRILNAVTPIPRFLHFTLNERMLRAFDGHDRVHVIDFDIKQGLQWPGLLQSLAMRAVPPAHVRITGVGESRQELQETGARLGRVAATLGLAFEFHAVVDRLEDVRLWMLHVKRGECVAVNCVLAAHRLLRDDTGAALADFLGLARSTGAAILLLGEHEDALNSGRWEARFARALRYYAAAFDAVDAAGLSDASPARLKAEEMFAREIRNAVAFEAADRFERHESFAGWQQRMEEGGFQNAGIGDREAMQGRMIARMFAPGNYSVQAQGDGEGLTLRWLDQPMYTVSAWT
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J20271
Panicum virgatum
Pavir.J20271
N
0.966
Sb10g001690
Sorghum bicolor
Sb10g001690
N
0.926
Pavir.Da02353
Panicum virgatum
Pavir.Da02353
N
0.915
AC234164.1_FG004
Zea mays
AC234164.1_FG004
N
0.907
OPUNC06G01470
Oryza punctata
OPUNC06G01470
N
0.877
OBART06G01600
Oryza barthii
OBART06G01600
N
0.864
BGIOSGA022020
Oryza indica
BGIOSGA022020
N
0.860
OGLUM06G01600
Oryza glumaepatula
OGLUM06G01600
N
0.860
ORUFI06G01590
Oryza rufipogon
ORUFI06G01590
N
0.860
DLT
Oryza sativa
OS06G0127800
N
0.860
ORGLA06G0016600
Oryza glaberrima
ORGLA06G0016600
N
0.855
Traes_4AL_7B4A599EC
Triticum aestivum
Traes_4AL_7B4A599EC
N
0.855
ONIVA06G01910
Oryza nivara
ONIVA06G01910
N
0.843
LPERR06G01410
Leersia perrieri
LPERR06G01410
N
0.833
Traes_4AL_FB3CE240C
Triticum aestivum
Traes_4AL_FB3CE240C
N
0.812
AC200124.3_FG005
Zea mays
AC200124.3_FG005
N
0.800
BRADI1G49630
Brachypodium distachyon
BRADI1G49630
N
0.773
Traes_4BS_EC11C40EC
Triticum aestivum
Traes_4BS_EC11C40EC
N
0.767