CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
DLT
(
Oryza sativa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OS06G0127800
T201077_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS06T0127800-01
GRAS
217
594
LVRALTACADSLSAGNHEAANYYLARLGEMASPAGPTPMHRVAAYFTEALALRVVRMWPHMFDIGPPRELTDDAFGGGDDDAMALRILNAITPIPRFLHFTLNERLLREFEGHERVHVIDFDIKQGLQWPGLLQSLAARAVPPAHVRITGVGESRQELQETGARLARVAAALGLAFEFHAVVDRLEDVRLWMLHVKRGECVAVNCVLAMHRLLRDDAALTDFLGLARSTGATILLLGEHEGGGLNSGRWEARFARALRYYAAAFDAVDAAGLPEASPARAKAEEMFAREIRNAVAFEGPERFERHESFAGWRRRMEDGGGFKNAGIGEREAMQGRMIARMFGPDKYTVQAHGGGGSGGGEALTLRWLDQPLYTVTAWT
Links
Other
GRAS
family TFs
Other
Oryza sativa
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022020
Oryza indica
BGIOSGA022020
N
1.000
OGLUM06G01600
Oryza glumaepatula
OGLUM06G01600
N
1.000
ORUFI06G01590
Oryza rufipogon
ORUFI06G01590
N
1.000
ORGLA06G0016600
Oryza glaberrima
ORGLA06G0016600
N
0.995
OBART06G01600
Oryza barthii
OBART06G01600
N
0.975
ONIVA06G01910
Oryza nivara
ONIVA06G01910
N
0.974
OPUNC06G01470
Oryza punctata
OPUNC06G01470
N
0.954
Si008220m.g
Setaria italica
Si008220m.g
N
0.860
Sb10g001690
Sorghum bicolor
Sb10g001690
N
0.849
Pavir.Da02353
Panicum virgatum
Pavir.Da02353
N
0.833
AC234164.1_FG004
Zea mays
AC234164.1_FG004
N
0.830
Pavir.J20271
Panicum virgatum
Pavir.J20271
N
0.826
LPERR06G01410
Leersia perrieri
LPERR06G01410
N
0.814
ORUFI03G24530
Oryza rufipogon
ORUFI03G24530
N
0.784
BRADI1G49630
Brachypodium distachyon
BRADI1G49630
N
0.775
Traes_4AL_FB3CE240C
Triticum aestivum
Traes_4AL_FB3CE240C
N
0.766
BGIOSGA013002
Oryza indica
BGIOSGA013002
N
0.753
ONIVA07G08430
Oryza nivara
ONIVA07G08430
N
0.746
ORGLA03G0222700
Oryza glaberrima
ORGLA03G0222700
N
0.742
ONIVA04G12350
Oryza nivara
ONIVA04G12350
N
0.734
Traes_4AL_7B4A599EC
Triticum aestivum
Traes_4AL_7B4A599EC
N
0.727
OBART03G24660
Oryza barthii
OBART03G24660
N
0.722
Traes_4BS_EC11C40EC
Triticum aestivum
Traes_4BS_EC11C40EC
N
0.711
AC200124.3_FG005
Zea mays
AC200124.3_FG005
N
0.709
ORUFI04G15420
Oryza rufipogon
ORUFI04G15420
N
0.709
OGLUM07G08700
Oryza glumaepatula
OGLUM07G08700
N
0.704