CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0230s0190
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0230s0190
T203136_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0230s0190.1.p
GRAS
237
298
LVHTLLACAEAIQQENLKFADALFKLIGPLASSQAGAMRKVARYFAEALARRIYKIFPQDYS
SapurV1A.0230s0190.1.p
GRAS
293
570
FPQDYSILEAFANASRVHVIDFGLKQGMQWPALIQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVKFEFRGFVANSLADLEAEILDLRPPEVEAVAVNSVFELHRLLDRPGDIDKVLGSIKAMRPKIVTIVEQEANHNGPVFLDRFNEALHYYSSLFDSLEGSGLTPPSQDLVMSELYLGRQICNVVAYEGAERVERHETLAQWRTRFGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWR
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0005s14540
Populus trichocarpa
POPTR_0005s14540
I
0.766
POPTR_0004s08890
Populus trichocarpa
POPTR_0004s08890
I
0.757
mgf018196m
Mimulus guttatus
mgf018196m
N
0.733
SapurV1A.0102s0220
Salix purpurea
SapurV1A.0102s0220
N
0.733
cassava6237.valid.m1
Manihot esculenta
cassava6237.valid.m1
I
0.724
evm.TU.supercontig_116.43
Carica papaya
evm.TU.supercontig_116.43
I
0.718
28677.m000055
Ricinus communis
28677.m000055
N
0.709
Ciclev10011367m.g
Citrus clementina
Ciclev10011367m.g
N
0.706
Eucgr.J01594
Eucalyptus grandis
Eucgr.J01594
I
0.706
orange1.1g008153m.g
Citrus sinensis
orange1.1g008153m.g
N
0.703
MDP0000669451
Malus domestica
MDP0000669451
I
0.700