gw.38.210.1 (Branchiostoma floridae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 gw.38.210.1 T227649_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hox12
M02075_2.00 		Ciona intestinalis
TTWAYKAY
RTMRTWAA		 PBM
Weirauch et al.(2014)
pTH6299 		0.624 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw.38.210.1 Homeodomain 2 58

Links

Other Homeodomain family TFs
Other Branchiostoma floridae TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCING00000011300 Ciona intestinalis ENSCING00000011300 N 0.735
ENSCSAVG00000005769 Ciona savignyi ENSCSAVG00000005769 N 0.735
HmN_000400200 Hymenolepis microstoma HmN_000400200 I 0.696
ML319810a Mnemiopsis leidyi ML319810a N 0.645
HDG10 Arabidopsis thaliana AT1G34650 N 0.624
hox12 Ciona intestinalis ENSCING00000007040 D 0.624
ENSCSAVG00000008685 Ciona savignyi ENSCSAVG00000008685 I 0.624
Sakowv30025348m.g Saccoglossus kowalevskii Sakowv30025348m.g I 0.623
Sakowv30000860m.g Saccoglossus kowalevskii Sakowv30000860m.g I 0.619
SPU_002631 Strongylocentrotus purpuratus SPU_002631 I 0.617
SPU_000388 Strongylocentrotus purpuratus SPU_000388 I 0.605
Ocbimv22015181m.g Octopus bimaculoides Ocbimv22015181m.g N 0.605
tetur32g01060 Tetranychus urticae tetur32g01060 I 0.603
AAEL012881 Aedes aegypti AAEL012881 I 0.602
ACYPI42210 Acyrthosiphon pisum ACYPI42210 I 0.602
ENSPMAG00000010089 Petromyzon marinus ENSPMAG00000010089 I 0.602
HMEL015396 Heliconius melpomene HMEL015396 I 0.602
KGM_06193 Danaus plexippus KGM_06193 I 0.602
MCINX001301 Melitaea cinxia MCINX001301 I 0.602
PHUM210980 Pediculus humanus PHUM210980 I 0.602
TC000424 Tribolium castaneum TC000424 I 0.602
CLEC002808 Cimex lectularius CLEC002808 I 0.602
AALB007457 Anopheles albimanus AALB007457 I 0.602
AATE016576 Anopheles atroparvus AATE016576 I 0.602
ADIR009852 Anopheles dirus ADIR009852 I 0.602
AMIN007516 Anopheles minimus AMIN007516 I 0.602
BGIBMGA007623 Bombyx mori BGIBMGA007623 I 0.600
GB51909 Apis mellifera GB51909 I 0.600
NV11609 Nasonia vitripennis NV11609 I 0.600
SINV26130 Solenopsis invicta SINV26130 I 0.600
Cflo_13663--XP_396835.3_APIME Camponotus floridanus Cflo_13663--XP_396835.3_APIME I 0.600
Hsal_12039--XP_396835.3_APIME Harpegnathos saltator Hsal_12039--XP_396835.3_APIME I 0.600
CGI_10027385 Crassostrea gigas CGI_10027385 N 0.599
LotgiG100031 Lottia gigantea LotgiG100031 N 0.599
e_gw.260.36.1 Branchiostoma floridae e_gw.260.36.1 I 0.599
e_gw.260.37.1 Branchiostoma floridae e_gw.260.37.1 I 0.599