CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22015181m.g
(
Octopus bimaculoides
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Ocbimv22015181m.g
T227792_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22015181m.p
Homeodomain
21
77
RKRRRPYSKYQIAELEREYAISTYISKSRRWELSQLLNLSERQIKIWFQNRRIKAKK
Links
Other
Homeodomain
family TFs
Other
Octopus bimaculoides
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10027385
Crassostrea gigas
CGI_10027385
N
0.855
LotgiG100031
Lottia gigantea
LotgiG100031
N
0.855
e_gw.260.36.1
Branchiostoma floridae
e_gw.260.36.1
I
0.732
e_gw.260.37.1
Branchiostoma floridae
e_gw.260.37.1
I
0.732
SNAPOd2T00025381001
Oikopleura dioica
SNAPOd2T00025381001
I
0.700
Sakowv30025348m.g
Saccoglossus kowalevskii
Sakowv30025348m.g
I
0.694
Sakowv30000860m.g
Saccoglossus kowalevskii
Sakowv30000860m.g
I
0.692
SPU_000388
Strongylocentrotus purpuratus
SPU_000388
I
0.691
SPU_002631
Strongylocentrotus purpuratus
SPU_002631
I
0.691
SNAPOd2T00003836001
Oikopleura dioica
SNAPOd2T00003836001
I
0.671
csin103306
Clonorchis sinensis
csin103306
I
0.660
T265_10106
Opisthorchis viverrini
T265_10106
I
0.660
ENSPMAG00000010089
Petromyzon marinus
ENSPMAG00000010089
I
0.655
HmN_000400200
Hymenolepis microstoma
HmN_000400200
I
0.655
gw.260.83.1
Branchiostoma floridae
gw.260.83.1
I
0.648
gw.260.84.1
Branchiostoma floridae
gw.260.84.1
I
0.648
SMU15029209
Schmidtea mediterranea
SMU15029209
I
0.646
ENSCING00000011300
Ciona intestinalis
ENSCING00000011300
N
0.632
ENSCSAVG00000005769
Ciona savignyi
ENSCSAVG00000005769
N
0.628
SMUV_0000036501
Syphacia muris
SMUV_0000036501
I
0.606
gw.38.210.1
Branchiostoma floridae
gw.38.210.1
I
0.605
PTRK_0000303300
Parastrongyloides trichosuri
PTRK_0000303300
I
0.602
RSKR_0000904600
Rhabditophanes kr3021
RSKR_0000904600
I
0.601