CAA77673 (Xenopus laevis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 CAA77673 T229678_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Lhx1
M00405_2.00 		Mus musculus
TRATDRNNN
NNNYHATYA		 PBM
Berger et al.(2008)
Lhx1_2240 		0.069 1.000
Lhx5
M00445_2.00 		Mus musculus
TAATKRNNN
NNNYMATTA		 PBM
Berger et al.(2008)
Lhx5_2279 		0.069 1.000
LHX1
M05410_2.00 		Homo sapiens
NTRATBRN
NYVATYAN		 SELEX
Yin et al.(2017)
LHX1_eDBD_HT-SELEX 		0.069 1.000
LHX5
M04936_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_HT-SELEX 		0.069 1.000
LHX1
M05411_2.00 		Homo sapiens
NHRAYGHN
NDCRTYDN		 SELEX
Yin et al.(2017)
LHX1_eDBD_Methyl-HT-SELEX 		0.069 1.000
LHX5
M04937_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_1 		0.069 1.000
LHX5
M04938_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_2 		0.069 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAA77673 Homeodomain 1 39

Links

Other Homeodomain family TFs
Other Xenopus laevis TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
lhx5.S Xenopus laevis XB-GENE-865965 I 0.866
lhx3.L Xenopus laevis XB-GENE-865930 I 0.852
PEQ_0000480201 Parascaris equorum PEQ_0000480201 N 0.815
MCINX000790 Melitaea cinxia MCINX000790 N 0.765
BGLB008237 Biomphalaria glabrata BGLB008237 N 0.753
ENSETEG00000007628 Echinops telfairi ENSETEG00000007628 I 0.748
ENSMMUG00000030441 Macaca mulatta ENSMMUG00000030441 I 0.748
ENSMMUG00000032301 Macaca mulatta ENSMMUG00000032301 I 0.748
ENSXMAG00000019975 Xiphophorus maculatus ENSXMAG00000019975 N 0.743
nRc.2.0.1.g13634 Romanomermis culicivorax nRc.2.0.1.g13634 N 0.740
ASIS021566 Anopheles sinensis ASIS021566 N 0.738
HPBE_0002557401 Heligmosomoides bakeri HPBE_0002557401 N 0.732
CMU_000020 Cryptosporidium muris CMU_000020 N 0.730
GPLIN_001034800 Globodera pallida GPLIN_001034800 N 0.730
Gorai.003G023300 Gossypium raimondii Gorai.003G023300 N 0.727
SNAPOd2T00000484001 Oikopleura dioica SNAPOd2T00000484001 N 0.725
TVAG_170510 Trichomonas vaginalis TVAG_170510 N 0.724
LLOJ003025 Lutzomyia longipalpis LLOJ003025 N 0.720
ENSPPYG00000005435 Pongo abelii ENSPPYG00000005435 N 0.711
ISCW021207 Ixodes scapularis ISCW021207 N 0.705
CJA41362 Caenorhabditis japonica CJA41362 N 0.699
MCINX013555 Melitaea cinxia MCINX013555 N 0.699
CJA33058 Caenorhabditis japonica CJA33058 N 0.698
nDi.2.2.2.g12219 Dirofilaria immitis nDi.2.2.2.g12219 N 0.696
ENSTRUG00000017521 Takifugu rubripes ENSTRUG00000017521 I 0.692
MTR_3g112300 Medicago truncatula MTR_3g112300 I 0.692
orange1.1g005863m.g Citrus sinensis orange1.1g005863m.g I 0.692
ECPE_0000380901 Echinostoma caproni ECPE_0000380901 N 0.690
SCUD_0000812001 Schistosoma curassoni SCUD_0000812001 N 0.690
SROB_0000391301 Schistosoma rodhaini SROB_0000391301 N 0.690
Cmyd_10012611 Chelonia mydas Cmyd_10012611 N 0.689
PEQ_0001057801 Parascaris equorum PEQ_0001057801 N 0.689
CpipJ_CPIJ015450 Culex pipiens CpipJ_CPIJ015450 N 0.688
CPIJ015450 Culex quinquefasciatus CPIJ015450 N 0.688
ACUA018278 Anopheles culicifacies ACUA018278 N 0.688
ANCDUO_21460 Ancylostoma duodenale ANCDUO_21460 N 0.687
ANCDUO_21488 Ancylostoma duodenale ANCDUO_21488 N 0.687
SVUK_0000323501 Strongylus vulgaris SVUK_0000323501 N 0.687
L798_12976 Zootermopsis nevadensis L798_12976 N 0.686
LCUP014212 Lucilia cuprina LCUP014212 N 0.686
ACEP17701 Atta cephalotes ACEP17701 N 0.685
ENSPMAG00000010256 Petromyzon marinus ENSPMAG00000010256 N 0.684
SINV18611 Solenopsis invicta SINV18611 N 0.684
L889_g12823 Steinernema feltiae L889_g12823 N 0.684
OBART08G15250 Oryza barthii OBART08G15250 N 0.682
ORGLA08G0133100 Oryza glaberrima ORGLA08G0133100 N 0.682
Minc08600 Meloidogyne incognita Minc08600 N 0.678
EMIHUDRAFT_241459 Emiliania huxleyi EMIHUDRAFT_241459 N 0.677
MTR_6g007613 Medicago truncatula MTR_6g007613 N 0.677
PEQ_0000908401 Parascaris equorum PEQ_0000908401 N 0.675
ENSPMAG00000009999 Petromyzon marinus ENSPMAG00000009999 N 0.674
ACAC_0000073601 Angiostrongylus cantonensis ACAC_0000073601 N 0.671
DILT_0001433701 Diphyllobothrium latum DILT_0001433701 N 0.668
L893_g22533 Steinernema glaseri L893_g22533 N 0.668
ENSAPLG00000006966 Anas platyrhynchos ENSAPLG00000006966 N 0.666
A_07772 Schistosoma haematobium A_07772 N 0.662
CGI_10009567 Crassostrea gigas CGI_10009567 N 0.659
L898_g2802 Steinernema monticolum L898_g2802 N 0.657
Brh_R000003 Buceros rhinoceros Brh_R000003 I 0.656
PEQ_0001303101 Parascaris equorum PEQ_0001303101 N 0.656
BGLB009356 Biomphalaria glabrata BGLB009356 N 0.650
EFV59239 Trichinella spiralis EFV59239 N 0.646
SCLCIDRAFT_1207514 Scleroderma citrinum SCLCIDRAFT_1207514 N 0.646
TRE_0000556301 Trichobilharzia regenti TRE_0000556301 N 0.646
NBR_0001551701 Nippostrongylus brasiliensis NBR_0001551701 N 0.645
EVEC_0001028401 Enterobius vermicularis EVEC_0001028401 N 0.644
PHOX2A Homo sapiens ENSG00000165462 D 0.641
MEIS3 Callithrix jacchus ENSCJAG00000011475 I 0.637
D917_09995 Trichinella nativa D917_09995 I 0.637
SROB_0000951501 Schistosoma rodhaini SROB_0000951501 N 0.637
fgeneshTM_pg.13_#_82 Tremella mesenterica fgeneshTM_pg.13_#_82 N 0.636
AAA85027 Xenopus laevis AAA85027 I 0.635
MVLG_07150 Microbotryum violaceum MVLG_07150 N 0.634
LotgiG178004 Lottia gigantea LotgiG178004 N 0.630
hoxb2.S Xenopus laevis XB-GENE-478530 I 0.630
hoxa10.L Xenopus laevis XB-GENE-6486002 I 0.630
hoxa4.S Xenopus laevis XB-GENE-865635 N 0.630
ENSCSAVG00000002570 Ciona savignyi ENSCSAVG00000002570 N 0.628
GLRG_06242 Colletotrichum graminicola GLRG_06242 N 0.624
SMTD_0001546801 Schistosoma mattheei SMTD_0001546801 N 0.622
AAA85030 Xenopus laevis AAA85030 N 0.612
L798_08191 Zootermopsis nevadensis L798_08191 N 0.611
CTTNBP2NL Monodelphis domestica ENSMODG00000001211 N 0.610
ENSSHAG00000016995 Sarcophilus harrisii ENSSHAG00000016995 N 0.610
Carubv10013054m.g Capsella rubella Carubv10013054m.g N 0.610
SVUK_0001098001 Strongylus vulgaris SVUK_0001098001 N 0.610
ACOC_0001152601 Angiostrongylus costaricensis ACOC_0001152601 N 0.601
ENSAMXG00000002457 Astyanax mexicanus ENSAMXG00000002457 I 0.558
ENSAPLG00000006228 Anas platyrhynchos ENSAPLG00000006228 I 0.558
ENSMGAG00000007924 Meleagris gallopavo ENSMGAG00000007924 I 0.558
LHX1 Taeniopygia guttata ENSTGUG00000008052 I 0.558
Aan_R014142 Calypte anna Aan_R014142 I 0.558
e_gw.94.75.1 Branchiostoma floridae e_gw.94.75.1 I 0.558
gw.94.22.1 Branchiostoma floridae gw.94.22.1 I 0.558
SBAD_0001148201 Soboliphyme baturini SBAD_0001148201 I 0.558
Ocbimv22029425m.g Octopus bimaculoides Ocbimv22029425m.g I 0.511
CGI_10025343 Crassostrea gigas CGI_10025343 I 0.069
EFV52646 Trichinella spiralis EFV52646 I 0.069
LHX1 Anolis carolinensis ENSACAG00000002508 I 0.069
ENSACAG00000005037 Anolis carolinensis ENSACAG00000005037 I 0.069
ENSAMEG00000008305 Ailuropoda melanoleuca ENSAMEG00000008305 I 0.069
ENSAMEG00000008592 Ailuropoda melanoleuca ENSAMEG00000008592 I 0.069
LHX5 Bos taurus ENSBTAG00000003107 I 0.069
LHX1 Bos taurus ENSBTAG00000033562 I 0.069
LHX5 Canis familiaris ENSCAFG00000009121 I 0.069
LHX1 Canis familiaris ENSCAFG00000017853 I 0.069
LHX5 Callithrix jacchus ENSCJAG00000009813 I 0.069
LHX1 Callithrix jacchus ENSCJAG00000015458 I 0.069
LHX1 Cavia porcellus ENSCPOG00000027154 I 0.069
ENSCSAG00000002361 Chlorocebus sabaeus ENSCSAG00000002361 I 0.069
ENSCSAG00000006059 Chlorocebus sabaeus ENSCSAG00000006059 I 0.069
lhx1b Danio rerio ENSDARG00000007944 I 0.069
lhx1a Danio rerio ENSDARG00000014018 I 0.069
LHX5 Dasypus novemcinctus ENSDNOG00000010448 I 0.069
LHX1 Dasypus novemcinctus ENSDNOG00000036189 I 0.069
Lhx5 Dipodomys ordii ENSDORG00000002125 I 0.069
Lhx1 Dipodomys ordii ENSDORG00000006956 I 0.069
LHX1 Equus caballus ENSECAG00000001597 I 0.069
LHX5 Equus caballus ENSECAG00000016915 I 0.069
LHX1 Erinaceus europaeus ENSEEUG00000002834 I 0.069
LHX1 Echinops telfairi ENSETEG00000003513 I 0.069
LHX5 Echinops telfairi ENSETEG00000006405 I 0.069
ENSFALG00000005291 Ficedula albicollis ENSFALG00000005291 I 0.069
ENSFALG00000007758 Ficedula albicollis ENSFALG00000007758 I 0.069
LHX1 Felis catus ENSFCAG00000005089 I 0.069
LHX5 Homo sapiens ENSG00000089116 D 0.069
LHX1 Homo sapiens ENSG00000273706 D 0.069
lhx1a Gasterosteus aculeatus ENSGACG00000013605 I 0.069
LHX1 Gallus gallus ENSGALG00000005409 I 0.069
Lhx5 Gallus gallus ENSGALG00000008303 I 0.069
LHX1 Gorilla gorilla ENSGGOG00000002703 I 0.069
LHX5 Gorilla gorilla ENSGGOG00000010583 I 0.069
ENSGMOG00000001730 Gadus morhua ENSGMOG00000001730 I 0.069
ENSGMOG00000002984 Gadus morhua ENSGMOG00000002984 I 0.069
ENSLACG00000004119 Latimeria chalumnae ENSLACG00000004119 I 0.069
ENSLACG00000018094 Latimeria chalumnae ENSLACG00000018094 I 0.069
LHX1 Loxodonta africana ENSLAFG00000006400 I 0.069
LHX5 Loxodonta africana ENSLAFG00000015121 I 0.069
ENSLOCG00000004960 Lepisosteus oculatus ENSLOCG00000004960 I 0.069
ENSLOCG00000008328 Lepisosteus oculatus ENSLOCG00000008328 I 0.069
ENSMEUG00000006658 Macropus eugenii ENSMEUG00000006658 I 0.069
LHX1 Myotis lucifugus ENSMLUG00000014749 I 0.069
ENSMMUG00000001577 Macaca mulatta ENSMMUG00000001577 I 0.069
ENSMMUG00000021668 Macaca mulatta ENSMMUG00000021668 I 0.069
ENSMODG00000027538 Monodelphis domestica ENSMODG00000027538 I 0.069
ENSMPUG00000002688 Mustela putorius furo ENSMPUG00000002688 I 0.069
ENSMPUG00000015060 Mustela putorius furo ENSMPUG00000015060 I 0.069
Lhx1 Mus musculus ENSMUSG00000018698 D 0.069
Lhx5 Mus musculus ENSMUSG00000029595 D 0.069
ENSNLEG00000000189 Nomascus leucogenys ENSNLEG00000000189 I 0.069
ENSNLEG00000002343 Nomascus leucogenys ENSNLEG00000002343 I 0.069
ENSOANG00000014248 Ornithorhynchus anatinus ENSOANG00000014248 I 0.069
ENSOARG00000000046 Ovis aries ENSOARG00000000046 I 0.069
LHX5 Oryctolagus cuniculus ENSOCUG00000009321 I 0.069
LHX1 Oryctolagus cuniculus ENSOCUG00000024664 I 0.069
LHX5 Otolemur garnettii ENSOGAG00000003519 I 0.069
LHX1 Otolemur garnettii ENSOGAG00000013789 I 0.069
ENSONIG00000010444 Oreochromis niloticus ENSONIG00000010444 I 0.069
ENSPANG00000019666 Papio anubis ENSPANG00000019666 I 0.069
ENSPANG00000022127 Papio anubis ENSPANG00000022127 I 0.069
LHX1 Procavia capensis ENSPCAG00000006272 I 0.069
LHX5 Procavia capensis ENSPCAG00000010694 I 0.069
ENSPFOG00000016138 Poecilia formosa ENSPFOG00000016138 I 0.069
ENSPPYG00000004992 Pongo abelii ENSPPYG00000004992 I 0.069
ENSPPYG00000008214 Pongo abelii ENSPPYG00000008214 I 0.069
ENSPSIG00000005953 Pelodiscus sinensis ENSPSIG00000005953 I 0.069
ENSPSIG00000016729 Pelodiscus sinensis ENSPSIG00000016729 I 0.069
LHX5 Pan troglodytes ENSPTRG00000005493 I 0.069
LHX1 Pan troglodytes ENSPTRG00000009050 I 0.069
LHX1 Pteropus vampyrus ENSPVAG00000015637 I 0.069
Lhx5 Rattus norvegicus ENSRNOG00000001392 I 0.069
Lhx1 Rattus norvegicus ENSRNOG00000002812 I 0.069
ENSSHAG00000010404 Sarcophilus harrisii ENSSHAG00000010404 I 0.069
LHX5 Sus scrofa ENSSSCG00000009869 I 0.069
LHX1 Sus scrofa ENSSSCG00000017692 I 0.069
ENSSTOG00000021620 Ictidomys tridecemlineatus ENSSTOG00000021620 I 0.069
ENSSTOG00000022593 Ictidomys tridecemlineatus ENSSTOG00000022593 I 0.069
LHX5 Tupaia belangeri ENSTBEG00000003770 I 0.069
lhx1a Tetraodon nigroviridis ENSTNIG00000014399 I 0.069
lhx1a Takifugu rubripes ENSTRUG00000000174 I 0.069
LHX1 Tursiops truncatus ENSTTRG00000008900 I 0.069
ENSXMAG00000005342 Xiphophorus maculatus ENSXMAG00000005342 I 0.069
HelroG70524 Helobdella robusta HelroG70524 I 0.069
SMAR007885 Strigamia maritima SMAR007885 I 0.069
SPU_006991 Strongylocentrotus purpuratus SPU_006991 I 0.069
Cmyd_10020021 Chelonia mydas Cmyd_10020021 I 0.069
ENSBTAP00000004042-D1 Bos grunniens ENSBTAP00000004042-D1 I 0.069
ENSMMUP00000034710 Macaca fascicularis ENSMMUP00000034710 I 0.069
ENSP00000254457-D1 Bos grunniens ENSP00000254457-D1 I 0.069
ENSP00000261731 Macaca fascicularis ENSP00000261731 I 0.069
Myotis_brandtii_LHX1_10031028 Myotis brandtii Myotis_brandtii_LHX1_10031028 I 0.069
Pvit_13537 Pogona vitticeps Pvit_13537 I 0.069
Pvit_16426 Pogona vitticeps Pvit_16426 I 0.069
Sakowv30042332m.g Saccoglossus kowalevskii Sakowv30042332m.g I 0.069
lhx1 Xenopus tropicalis XB-GENE-482482 I 0.069
lhx5 Xenopus tropicalis XB-GENE-490400 I 0.069
lhx1.L Xenopus laevis XB-GENE-856460 I 0.069
D918_09140 Trichuris suis D918_09140 I 0.069
TMUE_s0059000100 Trichuris muris TMUE_s0059000100 I 0.069