CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000066201
(
Syphacia muris
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
SMUV_0000066201
T237886_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000066201-mRNA-1
Paired box
14
139
GQGRVNQLGGVFINGRPLPHHIRLKIIEMASKGIKPCHISRQLRVSHGAVSKILNRYAETGSIMPGQIGGNPRSRLSVQAVEKQILALKAEQPNLCANELRSYLIEREICSSDNAPTVSSINRIFR
SMUV_0000066201-mRNA-1
Homeodomain
207
263
RRNRTSFTAKQLEILEAAFNANTYPDQEGREKISHSTGLSEEKIMTWFSNRRARCRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Syphacia muris
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm3656
Brugia malayi
Bm3656
N
0.819
nDi.2.2.2.g00518
Dirofilaria immitis
nDi.2.2.2.g00518
N
0.819
HPLM_0000710501
Haemonchus placei
HPLM_0000710501
N
0.764
HCOI01507400
Haemonchus contortus
HCOI01507400
N
0.764
ACAC_0000839201
Angiostrongylus cantonensis
ACAC_0000839201
N
0.753
ACOC_0000203501
Angiostrongylus costaricensis
ACOC_0000203501
N
0.747
L892_g7002
Steinernema scapterisci
L892_g7002
N
0.742
L596_g28013
Steinernema carpocapsae
L596_g28013
N
0.742
pax-3
Caenorhabditis elegans
WBGene00003939
N
0.736
L889_g18440
Steinernema feltiae
L889_g18440
N
0.731
L898_g1097
Steinernema monticolum
L898_g1097
N
0.731
L893_g26110
Steinernema glaseri
L893_g26110
N
0.725
CBN03186
Caenorhabditis brenneri
CBN03186
N
0.725
CBN25420
Caenorhabditis brenneri
CBN25420
N
0.725
RSKR_0000772000
Rhabditophanes kr3021
RSKR_0000772000
N
0.720
Bm10054
Brugia malayi
Bm10054
N
0.714
CRE04314
Caenorhabditis remanei
CRE04314
N
0.714
BTMF_0000840501
Brugia timori
BTMF_0000840501
N
0.714
WUBG_00484
Wuchereria bancrofti
WUBG_00484
N
0.709
nDi.2.2.2.g00519
Dirofilaria immitis
nDi.2.2.2.g00519
N
0.703
nLs.2.1.2.g02365
Litomosoides sigmodontis
nLs.2.1.2.g02365
N
0.703