Bo7g061750 (Brassica oleracea)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Bo7g061750 T239809_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.326 0.364
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.326 0.364
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.326 0.364
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.326 0.364
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.321 0.494
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g061750.1 HSF 1 82

Links

Other HSF family TFs
Other Brassica oleracea TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g190160 Brassica oleracea Bo4g190160 I 0.466
Bra016996 Brassica rapa Bra016996 I 0.466
Bra016998 Brassica rapa Bra016998 I 0.466
Bo2g165540 Brassica oleracea Bo2g165540 I 0.403
Bostr.3359s0057 Boechera stricta Bostr.3359s0057 I 0.392
Bo2g165560 Brassica oleracea Bo2g165560 I 0.391
Bra029226 Brassica rapa Bra029226 I 0.391
Bostr.0556s0470 Boechera stricta Bostr.0556s0470 I 0.377
Carubv10027643m.g Capsella rubella Carubv10027643m.g I 0.365
Bo01835s010 Brassica oleracea Bo01835s010 N 0.362
Bo4g190190 Brassica oleracea Bo4g190190 N 0.348
Cagra.2848s0007 Capsella grandiflora Cagra.2848s0007 I 0.344
Bra002882 Brassica rapa Bra002882 I 0.343
Bra030021 Brassica rapa Bra030021 I 0.340
Bra016994 Brassica rapa Bra016994 N 0.332
HSF4 Cavia porcellus ENSCPOG00000010834 I 0.332
EuGene.0200010072 Micromonas sp RCC299 EuGene.0200010072 I 0.329
HSF4 Dasypus novemcinctus ENSDNOG00000032363 I 0.327
ENSAMEG00000017238 Ailuropoda melanoleuca ENSAMEG00000017238 I 0.326
HSF4 Bos taurus ENSBTAG00000003514 I 0.326
HSF4 Canis familiaris ENSCAFG00000020379 I 0.326
ENSCSAG00000003768 Chlorocebus sabaeus ENSCSAG00000003768 I 0.326
Hsf4 Dipodomys ordii ENSDORG00000015128 I 0.326
HSF4 Equus caballus ENSECAG00000016708 I 0.326
HSF4 Felis catus ENSFCAG00000014099 I 0.326
HSF4 Homo sapiens ENSG00000102878 D 0.326
HSF4 Gorilla gorilla ENSGGOG00000011899 I 0.326
HSF4 Macaca mulatta ENSMMUG00000005906 I 0.326
ENSMPUG00000005418 Mustela putorius furo ENSMPUG00000005418 I 0.326
Hsf4 Mus musculus ENSMUSG00000033249 I 0.326
ENSNLEG00000004338 Nomascus leucogenys ENSNLEG00000004338 I 0.326
ENSOARG00000002740 Ovis aries ENSOARG00000002740 I 0.326
HSF4 Oryctolagus cuniculus ENSOCUG00000010001 I 0.326
HSF4 Otolemur garnettii ENSOGAG00000001391 I 0.326
HSF4 Ochotona princeps ENSOPRG00000015074 I 0.326
ENSPANG00000005017 Papio anubis ENSPANG00000005017 I 0.326
ENSPPYG00000007441 Pongo abelii ENSPPYG00000007441 I 0.326
HSF4 Pan troglodytes ENSPTRG00000034007 I 0.326
HSF4 Pteropus vampyrus ENSPVAG00000000402 I 0.326
HSF4 Sus scrofa ENSSSCG00000002792 I 0.326
ENSSTOG00000027009 Ictidomys tridecemlineatus ENSSTOG00000027009 I 0.326
HSF4 Tursiops truncatus ENSTTRG00000010241 I 0.326
ENSBTAP00000004568-D1 Bos grunniens ENSBTAP00000004568-D1 I 0.326
Bra013406 Brassica rapa Bra013406 I 0.325
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I 0.325
BRADI3G43710 Brachypodium distachyon BRADI3G43710 I 0.324
HSF4 Myotis lucifugus ENSMLUG00000011083 I 0.324
GLYMA08G12630 Glycine max GLYMA08G12630 I 0.324
GRMZM2G179802 Zea mays GRMZM2G179802 I 0.324
mgf006947m Mimulus guttatus mgf006947m I 0.324
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.324
PK09831.1 Cannabis sativa PK09831.1 I 0.324
GLYMA05G29470 Glycine max GLYMA05G29470 I 0.323
OPUNC02G15430 Oryza punctata OPUNC02G15430 I 0.323
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.323
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.323
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I 0.322
Pm010169 Prunus mume Pm010169 I 0.322
MDP0000126826 Malus domestica MDP0000126826 I 0.322
HSFA4A Arabidopsis thaliana AT4G18880 D 0.321
Bo7g106320 Brassica oleracea Bo7g106320 I 0.321
Bra012571 Brassica rapa Bra012571 I 0.321
Bra013412 Brassica rapa Bra013412 I 0.321
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.321
TCM_029630 Theobroma cacao TCM_029630 I 0.321
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.321
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.321
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.321
Bra013358 Brassica rapa Bra013358 I 0.320
MTR_8g087540 Medicago truncatula MTR_8g087540 I 0.320
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I 0.320
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I 0.320
BGIOSGA006438 Oryza indica BGIOSGA006438 I 0.319
Bo1g020010 Brassica oleracea Bo1g020010 I 0.319
Bo3g157380 Brassica oleracea Bo3g157380 I 0.319
Hsf4 Rattus norvegicus ENSRNOG00000015253 I 0.319
F775_00937 Aegilops tauschii F775_00937 I 0.319
LPERR02G13860 Leersia perrieri LPERR02G13860 I 0.319
OGLUM02G17550 Oryza glumaepatula OGLUM02G17550 I 0.319
OMERI02G17330 Oryza meridionalis OMERI02G17330 I 0.319
ONIVA02G18700 Oryza nivara ONIVA02G18700 I 0.319
ORUFI02G18130 Oryza rufipogon ORUFI02G18130 I 0.319
HSFA5 Oryza sativa OS02G0496100 I 0.319
POPTR_0004s06090 Populus trichocarpa POPTR_0004s06090 I 0.319
Si019082m.g Setaria italica Si019082m.g I 0.319
Traes_6AS_1537629B3 Triticum aestivum Traes_6AS_1537629B3 I 0.319
Traes_6DS_C59B6322F Triticum aestivum Traes_6DS_C59B6322F I 0.319
TRIUR3_11025 Triticum urartu TRIUR3_11025 I 0.319
mgf006143m Mimulus guttatus mgf006143m I 0.319
Lus10005420.g Linum usitatissimum Lus10005420.g I 0.318
Lus10015237.g Linum usitatissimum Lus10015237.g I 0.318